==27375== Memcheck, a memory error detector ==27375== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==27375== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==27375== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithBuskeForces -malloc_debug -malloc_dump -memory_info ==27375== Parent PID: 24856 ==27375== ==27375== ==27375== FILE DESCRIPTORS: 9 open (3 std) at exit. ==27375== Open file descriptor 12: ==27375== at 0x102C40BD: pipe (pipe.c:29) ==27375== by 0x1A49C07D: ??? ==27375== by 0x134F74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27375== by 0x10BBF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27375== by 0x10B58D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27375== by 0x10D46D38: PetscInitialize (pinit.c:924) ==27375== by 0xFADDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27375== by 0xFADDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27375== by 0x1241FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27375== by 0x11F593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27375== by 0x121AD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27375== by 0x1219D3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27375== by 0x121FE7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27375== by 0x11DD95: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==27375== ==27375== Open file descriptor 8: /dev/shm/open_mpi.0000 ==27375== at 0x102C8A5C: __open_nocancel (open64_nocancel.c:39) ==27375== by 0x1024CB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==27375== by 0xFB15822: ??? ==27375== by 0xFB1596F: ??? ==27375== by 0x1359C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27375== by 0x1359C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27375== by 0x13552922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27375== by 0x134F72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27375== by 0x10BBF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27375== by 0x10B58D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27375== by 0x10D46D38: PetscInitialize (pinit.c:924) ==27375== by 0xFADDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27375== by 0xFADDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27375== by 0x1241FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27375== by 0x11F593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27375== by 0x121AD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27375== by 0x1219D3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27375== by 0x121FE7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27375== by 0x11DD95: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==27375== ==27375== Open file descriptor 145: ==27375== ==27375== ==27375== Open file descriptor 142: ==27375== ==27375== ==27375== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithBuskeForces_valgrind.txt ==27375== ==27375== ==27375== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==27375== ==27375== ==27375== ==27375== HEAP SUMMARY: ==27375== in use at exit: 35,142 bytes in 286 blocks ==27375== total heap usage: 3,721,028 allocs, 3,720,742 frees, 3,156,107,520 bytes allocated ==27375== ==27375== LEAK SUMMARY: ==27375== definitely lost: 0 bytes in 0 blocks ==27375== indirectly lost: 0 bytes in 0 blocks ==27375== possibly lost: 0 bytes in 0 blocks ==27375== still reachable: 56 bytes in 3 blocks ==27375== suppressed: 35,086 bytes in 283 blocks ==27375== Reachable blocks (those to which a pointer was found) are not shown. ==27375== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==27375== ==27375== For lists of detected and suppressed errors, rerun with: -s ==27375== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)