==28045== Memcheck, a memory error detector ==28045== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==28045== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==28045== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==28045== Parent PID: 24856 ==28045== ==28045== ==28045== FILE DESCRIPTORS: 9 open (3 std) at exit. ==28045== Open file descriptor 12: ==28045== at 0x117BD0BD: pipe (pipe.c:29) ==28045== by 0x1A49A07D: ??? ==28045== by 0x156464CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==28045== by 0x11323418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==28045== by 0x112BCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==28045== by 0xFFB3D38: PetscInitialize (pinit.c:924) ==28045== by 0xFADDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==28045== by 0xFADDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==28045== by 0x1FFF4F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==28045== by 0x1F9AF9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==28045== by 0x1FD464: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==28045== by 0x1FD304: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==28045== by 0x1FD99B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==28045== by 0x1F7F15: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==28045== ==28045== Open file descriptor 8: /dev/shm/open_mpi.0000 ==28045== at 0x117C1A5C: __open_nocancel (open64_nocancel.c:39) ==28045== by 0x11745B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==28045== by 0xFB15822: ??? ==28045== by 0xFB1596F: ??? ==28045== by 0x156EB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==28045== by 0x156EB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==28045== by 0x156A1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==28045== by 0x156462DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==28045== by 0x11323418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==28045== by 0x112BCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==28045== by 0xFFB3D38: PetscInitialize (pinit.c:924) ==28045== by 0xFADDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==28045== by 0xFADDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==28045== by 0x1FFF4F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==28045== by 0x1F9AF9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==28045== by 0x1FD464: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==28045== by 0x1FD304: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==28045== by 0x1FD99B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==28045== by 0x1F7F15: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==28045== ==28045== Open file descriptor 145: ==28045== ==28045== ==28045== Open file descriptor 142: ==28045== ==28045== ==28045== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==28045== ==28045== ==28045== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==28045== ==28045== ==28045== ==28045== HEAP SUMMARY: ==28045== in use at exit: 35,142 bytes in 286 blocks ==28045== total heap usage: 9,687,193 allocs, 9,686,907 frees, 1,252,474,049 bytes allocated ==28045== ==28045== LEAK SUMMARY: ==28045== definitely lost: 0 bytes in 0 blocks ==28045== indirectly lost: 0 bytes in 0 blocks ==28045== possibly lost: 0 bytes in 0 blocks ==28045== still reachable: 56 bytes in 3 blocks ==28045== suppressed: 35,086 bytes in 283 blocks ==28045== Reachable blocks (those to which a pointer was found) are not shown. ==28045== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==28045== ==28045== For lists of detected and suppressed errors, rerun with: -s ==28045== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)