==41073== Memcheck, a memory error detector ==41073== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41073== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41073== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==41073== Parent PID: 24856 ==41073== ==41073== ==41073== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41073== Open file descriptor 12: ==41073== at 0x116940BD: pipe (pipe.c:29) ==41073== by 0x1A49A07D: ??? ==41073== by 0x156464CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41073== by 0x112E1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41073== by 0x1127AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41073== by 0xFF71D38: PetscInitialize (pinit.c:924) ==41073== by 0xFADDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41073== by 0xFADDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41073== by 0x1222CD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41073== by 0x11D84D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41073== by 0x11FE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41073== by 0x11FCDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41073== by 0x120373: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41073== by 0x11BC75: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==41073== ==41073== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41073== at 0x11698A5C: __open_nocancel (open64_nocancel.c:39) ==41073== by 0x1161CB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41073== by 0xFB15822: ??? ==41073== by 0xFB1596F: ??? ==41073== by 0x156EB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41073== by 0x156EB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41073== by 0x156A1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41073== by 0x156462DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41073== by 0x112E1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41073== by 0x1127AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41073== by 0xFF71D38: PetscInitialize (pinit.c:924) ==41073== by 0xFADDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41073== by 0xFADDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41073== by 0x1222CD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41073== by 0x11D84D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41073== by 0x11FE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41073== by 0x11FCDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41073== by 0x120373: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41073== by 0x11BC75: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==41073== ==41073== Open file descriptor 145: ==41073== ==41073== ==41073== Open file descriptor 142: ==41073== ==41073== ==41073== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==41073== ==41073== ==41073== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41073== ==41073== ==41073== ==41073== HEAP SUMMARY: ==41073== in use at exit: 35,142 bytes in 286 blocks ==41073== total heap usage: 3,485,625 allocs, 3,485,339 frees, 939,119,323 bytes allocated ==41073== ==41073== LEAK SUMMARY: ==41073== definitely lost: 0 bytes in 0 blocks ==41073== indirectly lost: 0 bytes in 0 blocks ==41073== possibly lost: 0 bytes in 0 blocks ==41073== still reachable: 56 bytes in 3 blocks ==41073== suppressed: 35,086 bytes in 283 blocks ==41073== Reachable blocks (those to which a pointer was found) are not shown. ==41073== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41073== ==41073== For lists of detected and suppressed errors, rerun with: -s ==41073== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)