==27038== Memcheck, a memory error detector ==27038== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==27038== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==27038== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==27038== Parent PID: 24856 ==27038== ==27038== ==27038== FILE DESCRIPTORS: 9 open (3 std) at exit. ==27038== Open file descriptor 12: ==27038== at 0x116D60BD: pipe (pipe.c:29) ==27038== by 0x1A49A07D: ??? ==27038== by 0x156464CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27038== by 0x11323418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27038== by 0x112BCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27038== by 0xFFB3D38: PetscInitialize (pinit.c:924) ==27038== by 0xFADDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27038== by 0xFADDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27038== by 0x429635: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==27038== by 0x41E0F9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27038== by 0x42430C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27038== by 0x4241AC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27038== by 0x424843: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27038== by 0x41C515: main (TestVertexBasedCellPopulation.cpp:19) ==27038== ==27038== Open file descriptor 8: /dev/shm/open_mpi.0000 ==27038== at 0x116DAA5C: __open_nocancel (open64_nocancel.c:39) ==27038== by 0x1165EB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==27038== by 0xFB15822: ??? ==27038== by 0xFB1596F: ??? ==27038== by 0x156EB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27038== by 0x156EB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27038== by 0x156A1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27038== by 0x156462DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27038== by 0x11323418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27038== by 0x112BCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27038== by 0xFFB3D38: PetscInitialize (pinit.c:924) ==27038== by 0xFADDE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27038== by 0xFADDEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27038== by 0x429635: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==27038== by 0x41E0F9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27038== by 0x42430C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27038== by 0x4241AC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27038== by 0x424843: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27038== by 0x41C515: main (TestVertexBasedCellPopulation.cpp:19) ==27038== ==27038== Open file descriptor 145: ==27038== ==27038== ==27038== Open file descriptor 142: ==27038== ==27038== ==27038== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexBasedCellPopulation_valgrind.txt ==27038== ==27038== ==27038== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==27038== ==27038== ==27038== ==27038== HEAP SUMMARY: ==27038== in use at exit: 35,215 bytes in 290 blocks ==27038== total heap usage: 155,238 allocs, 154,948 frees, 19,399,468 bytes allocated ==27038== ==27038== LEAK SUMMARY: ==27038== definitely lost: 0 bytes in 0 blocks ==27038== indirectly lost: 0 bytes in 0 blocks ==27038== possibly lost: 0 bytes in 0 blocks ==27038== still reachable: 56 bytes in 3 blocks ==27038== suppressed: 35,159 bytes in 287 blocks ==27038== Reachable blocks (those to which a pointer was found) are not shown. ==27038== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==27038== ==27038== For lists of detected and suppressed errors, rerun with: -s ==27038== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)