==40079== Memcheck, a memory error detector ==40079== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40079== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40079== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingNewCellBasedWritersTutorial -malloc_debug -malloc_dump -memory_info ==40079== Parent PID: 24178 ==40079== ==40079== ==40079== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40079== Open file descriptor 12: ==40079== at 0xF8610BD: pipe (pipe.c:29) ==40079== by 0x196DB07D: ??? ==40079== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40079== by 0x1015C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40079== by 0x100F5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40079== by 0x102A1D38: PetscInitialize (pinit.c:924) ==40079== by 0xF11FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40079== by 0xF11FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40079== by 0x1B8DC8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40079== by 0x1B2CFF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40079== by 0x1B669A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40079== by 0x1B6596: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40079== by 0x1B6BA9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40079== by 0x1B14F5: main (TestCreatingAndUsingNewCellBasedWritersTutorial.cpp:18) ==40079== ==40079== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40079== at 0xF865A5C: __open_nocancel (open64_nocancel.c:39) ==40079== by 0xF7E9B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40079== by 0xF157822: ??? ==40079== by 0xF15796F: ??? ==40079== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40079== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40079== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40079== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40079== by 0x1015C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40079== by 0x100F5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40079== by 0x102A1D38: PetscInitialize (pinit.c:924) ==40079== by 0xF11FE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40079== by 0xF11FEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40079== by 0x1B8DC8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40079== by 0x1B2CFF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40079== by 0x1B669A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40079== by 0x1B6596: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40079== by 0x1B6BA9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40079== by 0x1B14F5: main (TestCreatingAndUsingNewCellBasedWritersTutorial.cpp:18) ==40079== ==40079== Open file descriptor 145: ==40079== ==40079== ==40079== Open file descriptor 142: ==40079== ==40079== ==40079== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingNewCellBasedWritersTutorial_valgrind.txt ==40079== ==40079== ==40079== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40079== ==40079== ==40079== ==40079== HEAP SUMMARY: ==40079== in use at exit: 16,977 bytes in 69 blocks ==40079== total heap usage: 2,435,114 allocs, 2,435,045 frees, 260,076,789 bytes allocated ==40079== ==40079== LEAK SUMMARY: ==40079== definitely lost: 0 bytes in 0 blocks ==40079== indirectly lost: 0 bytes in 0 blocks ==40079== possibly lost: 0 bytes in 0 blocks ==40079== still reachable: 56 bytes in 3 blocks ==40079== suppressed: 16,921 bytes in 66 blocks ==40079== Reachable blocks (those to which a pointer was found) are not shown. ==40079== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40079== ==40079== For lists of detected and suppressed errors, rerun with: -s ==40079== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)