==40487== Memcheck, a memory error detector ==40487== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40487== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40487== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestWntCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==40487== Parent PID: 24178 ==40487== ==40487== ==40487== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40487== Open file descriptor 12: ==40487== at 0x1086D0BD: pipe (pipe.c:29) ==40487== by 0x1B39C07D: ??? ==40487== by 0x155384CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40487== by 0x104BA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40487== by 0x10453D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40487== by 0x6277D38: PetscInitialize (pinit.c:924) ==40487== by 0x1039CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40487== by 0x1039CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40487== by 0x1264BD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40487== by 0x1217C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40487== by 0x123E3A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40487== by 0x123D36: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40487== by 0x124349: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40487== by 0x11FFC5: main (TestWntCellCycleOdeSystem.cpp:18) ==40487== ==40487== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40487== at 0x10871A5C: __open_nocancel (open64_nocancel.c:39) ==40487== by 0x107F5B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40487== by 0x611C822: ??? ==40487== by 0x611C96F: ??? ==40487== by 0x155DD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40487== by 0x155DD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40487== by 0x15593922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40487== by 0x155382DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40487== by 0x104BA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40487== by 0x10453D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40487== by 0x6277D38: PetscInitialize (pinit.c:924) ==40487== by 0x1039CE75: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40487== by 0x1039CEC3: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40487== by 0x1264BD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40487== by 0x1217C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40487== by 0x123E3A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40487== by 0x123D36: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40487== by 0x124349: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40487== by 0x11FFC5: main (TestWntCellCycleOdeSystem.cpp:18) ==40487== ==40487== Open file descriptor 145: ==40487== ==40487== ==40487== Open file descriptor 142: ==40487== ==40487== ==40487== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestWntCellCycleOdeSystem_valgrind.txt ==40487== ==40487== ==40487== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40487== ==40487== ==40487== ==40487== HEAP SUMMARY: ==40487== in use at exit: 17,034 bytes in 72 blocks ==40487== total heap usage: 168,882 allocs, 168,810 frees, 87,753,833 bytes allocated ==40487== ==40487== LEAK SUMMARY: ==40487== definitely lost: 0 bytes in 0 blocks ==40487== indirectly lost: 0 bytes in 0 blocks ==40487== possibly lost: 0 bytes in 0 blocks ==40487== still reachable: 24 bytes in 2 blocks ==40487== suppressed: 17,010 bytes in 70 blocks ==40487== Reachable blocks (those to which a pointer was found) are not shown. ==40487== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40487== ==40487== For lists of detected and suppressed errors, rerun with: -s ==40487== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)