==42395== Memcheck, a memory error detector ==42395== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42395== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42395== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainDistributedMesh -malloc_debug -malloc_dump -memory_info ==42395== Parent PID: 25496 ==42395== ==42395== ==42395== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42395== Open file descriptor 12: ==42395== at 0xBC630BD: pipe (pipe.c:29) ==42395== by 0x1438A07D: ??? ==42395== by 0xFB504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42395== by 0xB56B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42395== by 0xB504D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42395== by 0x8205D38: PetscInitialize (pinit.c:924) ==42395== by 0xB41156F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42395== by 0xB4115BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42395== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42395== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42395== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42395== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42395== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42395== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==42395== ==42395== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42395== at 0xBC67A5C: __open_nocancel (open64_nocancel.c:39) ==42395== by 0xBBEBB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42395== by 0xB448822: ??? ==42395== by 0xB44896F: ??? ==42395== by 0xFBF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42395== by 0xFBF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42395== by 0xFBAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42395== by 0xFB502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42395== by 0xB56B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42395== by 0xB504D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42395== by 0x8205D38: PetscInitialize (pinit.c:924) ==42395== by 0xB41156F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42395== by 0xB4115BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42395== by 0x12A9B4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42395== by 0x125733: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42395== by 0x127D56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42395== by 0x127C52: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42395== by 0x128265: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42395== by 0x123F35: main (TestBidomainDistributedMesh.cpp:18) ==42395== ==42395== Open file descriptor 145: ==42395== ==42395== ==42395== Open file descriptor 142: ==42395== ==42395== ==42395== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainDistributedMesh_valgrind.txt ==42395== ==42395== ==42395== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42395== ==42395== ==42395== ==42395== HEAP SUMMARY: ==42395== in use at exit: 35,679 bytes in 299 blocks ==42395== total heap usage: 412,116 allocs, 411,817 frees, 106,318,989 bytes allocated ==42395== ==42395== LEAK SUMMARY: ==42395== definitely lost: 0 bytes in 0 blocks ==42395== indirectly lost: 0 bytes in 0 blocks ==42395== possibly lost: 0 bytes in 0 blocks ==42395== still reachable: 24 bytes in 2 blocks ==42395== suppressed: 35,655 bytes in 297 blocks ==42395== Reachable blocks (those to which a pointer was found) are not shown. ==42395== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42395== ==42395== For lists of detected and suppressed errors, rerun with: -s ==42395== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 52 from 35)