==26884== Memcheck, a memory error detector ==26884== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26884== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26884== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellsGenerator -malloc_debug -malloc_dump -memory_info ==26884== Parent PID: 25496 ==26884== ==26884== ==26884== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26884== Open file descriptor 12: ==26884== at 0xF8390BD: pipe (pipe.c:29) ==26884== by 0x196F607D: ??? ==26884== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26884== by 0x10132418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26884== by 0x100CBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26884== by 0x102BBD38: PetscInitialize (pinit.c:924) ==26884== by 0xF13A56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26884== by 0xF13A5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26884== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26884== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26884== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26884== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26884== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26884== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==26884== ==26884== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26884== at 0xF83DA5C: __open_nocancel (open64_nocancel.c:39) ==26884== by 0xF7C1B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26884== by 0xF171822: ??? ==26884== by 0xF17196F: ??? ==26884== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26884== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26884== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26884== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26884== by 0x10132418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26884== by 0x100CBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26884== by 0x102BBD38: PetscInitialize (pinit.c:924) ==26884== by 0xF13A56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26884== by 0xF13A5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26884== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26884== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26884== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26884== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26884== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26884== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==26884== ==26884== Open file descriptor 145: ==26884== ==26884== ==26884== Open file descriptor 142: ==26884== ==26884== ==26884== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellsGenerator_valgrind.txt ==26884== ==26884== ==26884== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26884== ==26884== ==26884== ==26884== HEAP SUMMARY: ==26884== in use at exit: 35,279 bytes in 291 blocks ==26884== total heap usage: 53,239 allocs, 52,948 frees, 9,621,788 bytes allocated ==26884== ==26884== LEAK SUMMARY: ==26884== definitely lost: 0 bytes in 0 blocks ==26884== indirectly lost: 0 bytes in 0 blocks ==26884== possibly lost: 0 bytes in 0 blocks ==26884== still reachable: 120 bytes in 4 blocks ==26884== suppressed: 35,159 bytes in 287 blocks ==26884== Reachable blocks (those to which a pointer was found) are not shown. ==26884== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26884== ==26884== For lists of detected and suppressed errors, rerun with: -s ==26884== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)