==41088== Memcheck, a memory error detector ==41088== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41088== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41088== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellMutationStateTutorial -malloc_debug -malloc_dump -memory_info ==41088== Parent PID: 25496 ==41088== ==41088== ==41088== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41088== Open file descriptor 12: ==41088== at 0x10D320BD: pipe (pipe.c:29) ==41088== by 0x196F607D: ??? ==41088== by 0x14CA34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41088== by 0x1097F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41088== by 0x10918D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41088== by 0xF60FD38: PetscInitialize (pinit.c:924) ==41088== by 0xF13A56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41088== by 0xF13A5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41088== by 0x149987: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41088== by 0x1442D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41088== by 0x146FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41088== by 0x146E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41088== by 0x147509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41088== by 0x1426F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==41088== ==41088== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41088== at 0x10D36A5C: __open_nocancel (open64_nocancel.c:39) ==41088== by 0x10CBAB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41088== by 0xF171822: ??? ==41088== by 0xF17196F: ??? ==41088== by 0x14D486DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41088== by 0x14D48938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41088== by 0x14CFE922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41088== by 0x14CA32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41088== by 0x1097F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41088== by 0x10918D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41088== by 0xF60FD38: PetscInitialize (pinit.c:924) ==41088== by 0xF13A56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41088== by 0xF13A5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41088== by 0x149987: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41088== by 0x1442D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41088== by 0x146FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41088== by 0x146E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41088== by 0x147509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41088== by 0x1426F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==41088== ==41088== Open file descriptor 145: ==41088== ==41088== ==41088== Open file descriptor 142: ==41088== ==41088== ==41088== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellMutationStateTutorial_valgrind.txt ==41088== ==41088== ==41088== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41088== ==41088== ==41088== ==41088== HEAP SUMMARY: ==41088== in use at exit: 35,142 bytes in 286 blocks ==41088== total heap usage: 4,132,500 allocs, 4,132,214 frees, 571,626,575 bytes allocated ==41088== ==41088== LEAK SUMMARY: ==41088== definitely lost: 0 bytes in 0 blocks ==41088== indirectly lost: 0 bytes in 0 blocks ==41088== possibly lost: 0 bytes in 0 blocks ==41088== still reachable: 56 bytes in 3 blocks ==41088== suppressed: 35,086 bytes in 283 blocks ==41088== Reachable blocks (those to which a pointer was found) are not shown. ==41088== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41088== ==41088== For lists of detected and suppressed errors, rerun with: -s ==41088== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)