==26951== Memcheck, a memory error detector ==26951== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26951== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26951== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==26951== Parent PID: 25496 ==26951== ==26951== ==26951== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26951== Open file descriptor 12: ==26951== at 0x110CF0BD: pipe (pipe.c:29) ==26951== by 0x196F607D: ??? ==26951== by 0x14CA34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26951== by 0x10D1C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26951== by 0x10CB5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26951== by 0xF9ACD38: PetscInitialize (pinit.c:924) ==26951== by 0xF4D756F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26951== by 0xF4D75BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26951== by 0x13CB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26951== by 0x137563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26951== by 0x13A174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26951== by 0x13A06F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26951== by 0x13A683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26951== by 0x135D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==26951== ==26951== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26951== at 0x110D3A5C: __open_nocancel (open64_nocancel.c:39) ==26951== by 0x11057B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26951== by 0xF50E822: ??? ==26951== by 0xF50E96F: ??? ==26951== by 0x14D486DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26951== by 0x14D48938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26951== by 0x14CFE922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26951== by 0x14CA32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26951== by 0x10D1C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26951== by 0x10CB5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26951== by 0xF9ACD38: PetscInitialize (pinit.c:924) ==26951== by 0xF4D756F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26951== by 0xF4D75BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26951== by 0x13CB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26951== by 0x137563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26951== by 0x13A174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26951== by 0x13A06F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26951== by 0x13A683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26951== by 0x135D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==26951== ==26951== Open file descriptor 145: ==26951== ==26951== ==26951== Open file descriptor 142: ==26951== ==26951== ==26951== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestEllipticBoxDomainPdeModifier_valgrind.txt ==26951== ==26951== ==26951== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26951== ==26951== ==26951== ==26951== HEAP SUMMARY: ==26951== in use at exit: 35,142 bytes in 286 blocks ==26951== total heap usage: 5,532,854 allocs, 5,532,568 frees, 597,486,985 bytes allocated ==26951== ==26951== LEAK SUMMARY: ==26951== definitely lost: 0 bytes in 0 blocks ==26951== indirectly lost: 0 bytes in 0 blocks ==26951== possibly lost: 0 bytes in 0 blocks ==26951== still reachable: 56 bytes in 3 blocks ==26951== suppressed: 35,086 bytes in 283 blocks ==26951== Reachable blocks (those to which a pointer was found) are not shown. ==26951== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26951== ==26951== For lists of detected and suppressed errors, rerun with: -s ==26951== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)