==42458== Memcheck, a memory error detector ==42458== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42458== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42458== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedVsBidomainProblem -malloc_debug -malloc_dump -memory_info ==42458== Parent PID: 25496 ==42458== ==42458== ==42458== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42458== Open file descriptor 12: ==42458== at 0xAC4D0BD: pipe (pipe.c:29) ==42458== by 0x1438A07D: ??? ==42458== by 0xD9F64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42458== by 0xB01B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42458== by 0xAFB4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42458== by 0xB4F6D38: PetscInitialize (pinit.c:924) ==42458== by 0xA53256F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42458== by 0xA5325BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42458== by 0x12E254: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42458== by 0x128EAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42458== by 0x12C1D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42458== by 0x12C076: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42458== by 0x12C70D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42458== by 0x1272D5: main (TestExtendedVsBidomainProblem.cpp:19) ==42458== ==42458== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42458== at 0xAC51A5C: __open_nocancel (open64_nocancel.c:39) ==42458== by 0xABD5B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42458== by 0xA569822: ??? ==42458== by 0xA56996F: ??? ==42458== by 0xDA9B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42458== by 0xDA9B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42458== by 0xDA51922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42458== by 0xD9F62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42458== by 0xB01B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42458== by 0xAFB4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42458== by 0xB4F6D38: PetscInitialize (pinit.c:924) ==42458== by 0xA53256F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42458== by 0xA5325BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42458== by 0x12E254: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42458== by 0x128EAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42458== by 0x12C1D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42458== by 0x12C076: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42458== by 0x12C70D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42458== by 0x1272D5: main (TestExtendedVsBidomainProblem.cpp:19) ==42458== ==42458== Open file descriptor 145: ==42458== ==42458== ==42458== Open file descriptor 142: ==42458== ==42458== ==42458== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedVsBidomainProblem_valgrind.txt ==42458== ==42458== ==42458== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42458== ==42458== ==42458== ==42458== HEAP SUMMARY: ==42458== in use at exit: 35,679 bytes in 299 blocks ==42458== total heap usage: 449,946 allocs, 449,647 frees, 115,109,599 bytes allocated ==42458== ==42458== LEAK SUMMARY: ==42458== definitely lost: 0 bytes in 0 blocks ==42458== indirectly lost: 0 bytes in 0 blocks ==42458== possibly lost: 0 bytes in 0 blocks ==42458== still reachable: 24 bytes in 2 blocks ==42458== suppressed: 35,655 bytes in 297 blocks ==42458== Reachable blocks (those to which a pointer was found) are not shown. ==42458== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42458== ==42458== For lists of detected and suppressed errors, rerun with: -s ==42458== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 61 from 35)