==42358== Memcheck, a memory error detector ==42358== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42358== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42358== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestMatrixVentilationProblem -malloc_debug -malloc_dump -memory_info ==42358== Parent PID: 25496 ==42358== ==42358== ==42358== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42358== Open file descriptor 12: ==42358== at 0x821D0BD: pipe (pipe.c:29) ==42358== by 0x107F107D: ??? ==42358== by 0xBD804CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42358== by 0x8418418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42358== by 0x83B1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42358== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==42358== by 0x7A3556F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42358== by 0x7A355BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42358== by 0x117742: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42358== by 0x1128B9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42358== by 0x1155E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42358== by 0x115486: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42358== by 0x115B1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42358== by 0x110B35: main (TestMatrixVentilationProblem.cpp:19) ==42358== ==42358== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42358== at 0x8221A5C: __open_nocancel (open64_nocancel.c:39) ==42358== by 0x81A5B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42358== by 0x7A6C822: ??? ==42358== by 0x7A6C96F: ??? ==42358== by 0xBE256DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42358== by 0xBE25938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42358== by 0xBDDB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42358== by 0xBD802DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42358== by 0x8418418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42358== by 0x83B1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42358== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==42358== by 0x7A3556F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42358== by 0x7A355BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42358== by 0x117742: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42358== by 0x1128B9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42358== by 0x1155E6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42358== by 0x115486: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42358== by 0x115B1D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42358== by 0x110B35: main (TestMatrixVentilationProblem.cpp:19) ==42358== ==42358== Open file descriptor 145: ==42358== ==42358== ==42358== Open file descriptor 142: ==42358== ==42358== ==42358== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMatrixVentilationProblem_valgrind.txt ==42358== ==42358== ==42358== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42358== ==42358== ==42358== ==42358== HEAP SUMMARY: ==42358== in use at exit: 35,183 bytes in 289 blocks ==42358== total heap usage: 121,329 allocs, 121,040 frees, 184,133,897 bytes allocated ==42358== ==42358== LEAK SUMMARY: ==42358== definitely lost: 0 bytes in 0 blocks ==42358== indirectly lost: 0 bytes in 0 blocks ==42358== possibly lost: 0 bytes in 0 blocks ==42358== still reachable: 24 bytes in 2 blocks ==42358== suppressed: 35,159 bytes in 287 blocks ==42358== Reachable blocks (those to which a pointer was found) are not shown. ==42358== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42358== ==42358== For lists of detected and suppressed errors, rerun with: -s ==42358== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)