==27454== Memcheck, a memory error detector ==27454== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==27454== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==27454== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulationWithGhostNodes -malloc_debug -malloc_dump -memory_info ==27454== Parent PID: 25496 ==27454== ==27454== ==27454== FILE DESCRIPTORS: 9 open (3 std) at exit. ==27454== Open file descriptor 12: ==27454== at 0x10DD70BD: pipe (pipe.c:29) ==27454== by 0x196F607D: ??? ==27454== by 0x14CA14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27454== by 0x1093D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27454== by 0x108D6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27454== by 0xF5CDD38: PetscInitialize (pinit.c:924) ==27454== by 0xF13A56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27454== by 0xF13A5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27454== by 0x15BB7D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==27454== by 0x1541AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27454== by 0x15765A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27454== by 0x1574FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27454== by 0x157B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27454== by 0x1525D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==27454== ==27454== Open file descriptor 8: /dev/shm/open_mpi.0000 ==27454== at 0x10DDBA5C: __open_nocancel (open64_nocancel.c:39) ==27454== by 0x10D5FB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==27454== by 0xF171822: ??? ==27454== by 0xF17196F: ??? ==27454== by 0x14D486DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27454== by 0x14D48938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27454== by 0x14CFE922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27454== by 0x14CA12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27454== by 0x1093D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27454== by 0x108D6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27454== by 0xF5CDD38: PetscInitialize (pinit.c:924) ==27454== by 0xF13A56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27454== by 0xF13A5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27454== by 0x15BB7D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==27454== by 0x1541AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27454== by 0x15765A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27454== by 0x1574FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27454== by 0x157B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27454== by 0x1525D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==27454== ==27454== Open file descriptor 145: ==27454== ==27454== ==27454== Open file descriptor 142: ==27454== ==27454== ==27454== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulationWithGhostNodes_valgrind.txt ==27454== ==27454== ==27454== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==27454== ==27454== ==27454== ==27454== HEAP SUMMARY: ==27454== in use at exit: 35,215 bytes in 290 blocks ==27454== total heap usage: 217,550 allocs, 217,260 frees, 33,605,345 bytes allocated ==27454== ==27454== LEAK SUMMARY: ==27454== definitely lost: 0 bytes in 0 blocks ==27454== indirectly lost: 0 bytes in 0 blocks ==27454== possibly lost: 0 bytes in 0 blocks ==27454== still reachable: 56 bytes in 3 blocks ==27454== suppressed: 35,159 bytes in 287 blocks ==27454== Reachable blocks (those to which a pointer was found) are not shown. ==27454== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==27454== ==27454== For lists of detected and suppressed errors, rerun with: -s ==27454== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)