==41317== Memcheck, a memory error detector ==41317== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41317== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41317== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningContactInhibitionSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==41317== Parent PID: 25496 ==41317== ==41317== ==41317== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41317== Open file descriptor 12: ==41317== at 0x10DD70BD: pipe (pipe.c:29) ==41317== by 0x196F607D: ??? ==41317== by 0x14CA14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41317== by 0x1093D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41317== by 0x108D6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41317== by 0xF5CDD38: PetscInitialize (pinit.c:924) ==41317== by 0xF13A56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41317== by 0xF13A5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41317== by 0x128209: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41317== by 0x123673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41317== by 0x1259CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41317== by 0x1258CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41317== by 0x125EDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41317== by 0x121E75: main (TestRunningContactInhibitionSimulationsTutorial.cpp:18) ==41317== ==41317== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41317== at 0x10DDBA5C: __open_nocancel (open64_nocancel.c:39) ==41317== by 0x10D5FB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41317== by 0xF171822: ??? ==41317== by 0xF17196F: ??? ==41317== by 0x14D486DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41317== by 0x14D48938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41317== by 0x14CFE922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41317== by 0x14CA12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41317== by 0x1093D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41317== by 0x108D6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41317== by 0xF5CDD38: PetscInitialize (pinit.c:924) ==41317== by 0xF13A56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41317== by 0xF13A5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41317== by 0x128209: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41317== by 0x123673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41317== by 0x1259CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41317== by 0x1258CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41317== by 0x125EDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41317== by 0x121E75: main (TestRunningContactInhibitionSimulationsTutorial.cpp:18) ==41317== ==41317== Open file descriptor 145: ==41317== ==41317== ==41317== Open file descriptor 142: ==41317== ==41317== ==41317== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningContactInhibitionSimulationsTutorial_valgrind.txt ==41317== ==41317== ==41317== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41317== ==41317== ==41317== ==41317== HEAP SUMMARY: ==41317== in use at exit: 35,142 bytes in 286 blocks ==41317== total heap usage: 9,982,485 allocs, 9,982,199 frees, 3,394,869,868 bytes allocated ==41317== ==41317== LEAK SUMMARY: ==41317== definitely lost: 0 bytes in 0 blocks ==41317== indirectly lost: 0 bytes in 0 blocks ==41317== possibly lost: 0 bytes in 0 blocks ==41317== still reachable: 56 bytes in 3 blocks ==41317== suppressed: 35,086 bytes in 283 blocks ==41317== Reachable blocks (those to which a pointer was found) are not shown. ==41317== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41317== ==41317== For lists of detected and suppressed errors, rerun with: -s ==41317== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)