==27193== Memcheck, a memory error detector ==27193== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==27193== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==27193== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationTime -malloc_debug -malloc_dump -memory_info ==27193== Parent PID: 25496 ==27193== ==27193== ==27193== FILE DESCRIPTORS: 9 open (3 std) at exit. ==27193== Open file descriptor 12: ==27193== at 0xD8A60BD: pipe (pipe.c:29) ==27193== by 0x196F607D: ??? ==27193== by 0x12B1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27193== by 0xFE2F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27193== by 0xFDC8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27193== by 0xFF76D38: PetscInitialize (pinit.c:924) ==27193== by 0xD4A856F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27193== by 0xD4A85BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27193== by 0x15B7E4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27193== by 0x155E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27193== by 0x158E6E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27193== by 0x158D0E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27193== by 0x1593A5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27193== by 0x154225: main (TestSimulationTime.cpp:19) ==27193== ==27193== Open file descriptor 8: /dev/shm/open_mpi.0000 ==27193== at 0xD8AAA5C: __open_nocancel (open64_nocancel.c:39) ==27193== by 0xD82EB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==27193== by 0xD4DF822: ??? ==27193== by 0xD4DF96F: ??? ==27193== by 0x12BC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27193== by 0x12BC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27193== by 0x12B79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27193== by 0x12B1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27193== by 0xFE2F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27193== by 0xFDC8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27193== by 0xFF76D38: PetscInitialize (pinit.c:924) ==27193== by 0xD4A856F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27193== by 0xD4A85BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27193== by 0x15B7E4: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27193== by 0x155E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27193== by 0x158E6E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27193== by 0x158D0E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27193== by 0x1593A5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27193== by 0x154225: main (TestSimulationTime.cpp:19) ==27193== ==27193== Open file descriptor 145: ==27193== ==27193== ==27193== Open file descriptor 142: ==27193== ==27193== ==27193== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationTime_valgrind.txt ==27193== ==27193== ==27193== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==27193== ==27193== ==27193== ==27193== HEAP SUMMARY: ==27193== in use at exit: 35,183 bytes in 289 blocks ==27193== total heap usage: 36,986 allocs, 36,697 frees, 7,834,014 bytes allocated ==27193== ==27193== LEAK SUMMARY: ==27193== definitely lost: 0 bytes in 0 blocks ==27193== indirectly lost: 0 bytes in 0 blocks ==27193== possibly lost: 0 bytes in 0 blocks ==27193== still reachable: 24 bytes in 2 blocks ==27193== suppressed: 35,159 bytes in 287 blocks ==27193== Reachable blocks (those to which a pointer was found) are not shown. ==27193== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==27193== ==27193== For lists of detected and suppressed errors, rerun with: -s ==27193== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)