==41943== Memcheck, a memory error detector ==41943== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41943== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41943== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestAirwayGenerator -malloc_debug -malloc_dump -memory_info ==41943== Parent PID: 25029 ==41943== ==41943== ==41943== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41943== Open file descriptor 12: ==41943== at 0x6BE00BD: pipe (pipe.c:29) ==41943== by 0x107C907D: ??? ==41943== by 0xB7674CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41943== by 0x5EE5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41943== by 0x5E7ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41943== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==41943== by 0x5DA556F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41943== by 0x5DA55BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41943== by 0x11872F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41943== by 0x11390D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41943== by 0x1166E8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41943== by 0x116588: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41943== by 0x116C1F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41943== by 0x111D35: main (TestAirwayGenerator.cpp:19) ==41943== ==41943== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41943== at 0x6BE4A5C: __open_nocancel (open64_nocancel.c:39) ==41943== by 0x6B68B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41943== by 0x5DDC822: ??? ==41943== by 0x5DDC96F: ??? ==41943== by 0xB80E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41943== by 0xB80E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41943== by 0xB7C4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41943== by 0xB7672DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41943== by 0x5EE5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41943== by 0x5E7ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41943== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==41943== by 0x5DA556F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41943== by 0x5DA55BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41943== by 0x11872F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41943== by 0x11390D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41943== by 0x1166E8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41943== by 0x116588: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41943== by 0x116C1F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41943== by 0x111D35: main (TestAirwayGenerator.cpp:19) ==41943== ==41943== Open file descriptor 145: ==41943== ==41943== ==41943== Open file descriptor 142: ==41943== ==41943== ==41943== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAirwayGenerator_valgrind.txt ==41943== ==41943== ==41943== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41943== ==41943== ==41943== ==41943== HEAP SUMMARY: ==41943== in use at exit: 35,183 bytes in 289 blocks ==41943== total heap usage: 233,811 allocs, 233,522 frees, 256,414,536 bytes allocated ==41943== ==41943== LEAK SUMMARY: ==41943== definitely lost: 0 bytes in 0 blocks ==41943== indirectly lost: 0 bytes in 0 blocks ==41943== possibly lost: 0 bytes in 0 blocks ==41943== still reachable: 24 bytes in 2 blocks ==41943== suppressed: 35,159 bytes in 287 blocks ==41943== Reachable blocks (those to which a pointer was found) are not shown. ==41943== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41943== ==41943== For lists of detected and suppressed errors, rerun with: -s ==41943== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)