==26837== Memcheck, a memory error detector ==26837== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26837== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26837== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==26837== Parent PID: 25029 ==26837== ==26837== ==26837== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26837== Open file descriptor 12: ==26837== at 0xF0B90BD: pipe (pipe.c:29) ==26837== by 0x196E607D: ??? ==26837== by 0x13C7E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26837== by 0xED06418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26837== by 0xEC9FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26837== by 0xD996D38: PetscInitialize (pinit.c:924) ==26837== by 0xD4BF56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26837== by 0xD4BF5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26837== by 0x133ACB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26837== by 0x12CEE3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26837== by 0x12FA38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26837== by 0x12F933: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26837== by 0x12FF47: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26837== by 0x12B6E5: main (TestCaUpdateRules.cpp:18) ==26837== ==26837== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26837== at 0xF0BDA5C: __open_nocancel (open64_nocancel.c:39) ==26837== by 0xF041B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26837== by 0xD4F6822: ??? ==26837== by 0xD4F696F: ??? ==26837== by 0x13D236DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26837== by 0x13D23938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26837== by 0x13CD9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26837== by 0x13C7E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26837== by 0xED06418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26837== by 0xEC9FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26837== by 0xD996D38: PetscInitialize (pinit.c:924) ==26837== by 0xD4BF56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26837== by 0xD4BF5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26837== by 0x133ACB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26837== by 0x12CEE3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26837== by 0x12FA38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26837== by 0x12F933: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26837== by 0x12FF47: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26837== by 0x12B6E5: main (TestCaUpdateRules.cpp:18) ==26837== ==26837== Open file descriptor 145: ==26837== ==26837== ==26837== Open file descriptor 142: ==26837== ==26837== ==26837== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==26837== ==26837== ==26837== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26837== ==26837== ==26837== ==26837== HEAP SUMMARY: ==26837== in use at exit: 35,215 bytes in 290 blocks ==26837== total heap usage: 39,558 allocs, 39,268 frees, 8,118,989 bytes allocated ==26837== ==26837== LEAK SUMMARY: ==26837== definitely lost: 0 bytes in 0 blocks ==26837== indirectly lost: 0 bytes in 0 blocks ==26837== possibly lost: 0 bytes in 0 blocks ==26837== still reachable: 56 bytes in 3 blocks ==26837== suppressed: 35,159 bytes in 287 blocks ==26837== Reachable blocks (those to which a pointer was found) are not shown. ==26837== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26837== ==26837== For lists of detected and suppressed errors, rerun with: -s ==26837== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)