==40716== Memcheck, a memory error detector ==40716== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40716== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40716== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellMutationStateTutorial -malloc_debug -malloc_dump -memory_info ==40716== Parent PID: 25029 ==40716== ==40716== ==40716== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40716== Open file descriptor 12: ==40716== at 0x10D220BD: pipe (pipe.c:29) ==40716== by 0x196E507D: ??? ==40716== by 0x14C9F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40716== by 0x1096F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40716== by 0x10908D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40716== by 0xF5FFD38: PetscInitialize (pinit.c:924) ==40716== by 0xF12A56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40716== by 0xF12A5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40716== by 0x14A99B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40716== by 0x1452D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40716== by 0x147FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40716== by 0x147E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40716== by 0x148509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40716== by 0x1436F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==40716== ==40716== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40716== at 0x10D26A5C: __open_nocancel (open64_nocancel.c:39) ==40716== by 0x10CAAB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40716== by 0xF161822: ??? ==40716== by 0xF16196F: ??? ==40716== by 0x14D446DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40716== by 0x14D44938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40716== by 0x14CFA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40716== by 0x14C9F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40716== by 0x1096F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40716== by 0x10908D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40716== by 0xF5FFD38: PetscInitialize (pinit.c:924) ==40716== by 0xF12A56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40716== by 0xF12A5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40716== by 0x14A99B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40716== by 0x1452D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40716== by 0x147FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40716== by 0x147E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40716== by 0x148509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40716== by 0x1436F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==40716== ==40716== Open file descriptor 145: ==40716== ==40716== ==40716== Open file descriptor 142: ==40716== ==40716== ==40716== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellMutationStateTutorial_valgrind.txt ==40716== ==40716== ==40716== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40716== ==40716== ==40716== ==40716== HEAP SUMMARY: ==40716== in use at exit: 35,142 bytes in 286 blocks ==40716== total heap usage: 4,254,668 allocs, 4,254,382 frees, 574,166,392 bytes allocated ==40716== ==40716== LEAK SUMMARY: ==40716== definitely lost: 0 bytes in 0 blocks ==40716== indirectly lost: 0 bytes in 0 blocks ==40716== possibly lost: 0 bytes in 0 blocks ==40716== still reachable: 56 bytes in 3 blocks ==40716== suppressed: 35,086 bytes in 283 blocks ==40716== Reachable blocks (those to which a pointer was found) are not shown. ==40716== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40716== ==40716== For lists of detected and suppressed errors, rerun with: -s ==40716== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)