==42110== Memcheck, a memory error detector ==42110== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42110== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42110== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==42110== Parent PID: 25029 ==42110== ==42110== ==42110== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42110== Open file descriptor 12: ==42110== at 0xA9C00BD: pipe (pipe.c:29) ==42110== by 0x1436407D: ??? ==42110== by 0xD95E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42110== by 0xA2C8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42110== by 0xA261D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42110== by 0xB132D38: PetscInitialize (pinit.c:924) ==42110== by 0xA16E56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42110== by 0xA16E5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42110== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42110== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42110== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42110== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42110== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42110== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==42110== ==42110== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42110== at 0xA9C4A5C: __open_nocancel (open64_nocancel.c:39) ==42110== by 0xA948B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42110== by 0xA1A5822: ??? ==42110== by 0xA1A596F: ??? ==42110== by 0xDA036DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42110== by 0xDA03938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42110== by 0xD9B9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42110== by 0xD95E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42110== by 0xA2C8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42110== by 0xA261D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42110== by 0xB132D38: PetscInitialize (pinit.c:924) ==42110== by 0xA16E56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42110== by 0xA16E5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42110== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42110== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42110== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42110== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42110== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42110== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==42110== ==42110== Open file descriptor 145: ==42110== ==42110== ==42110== Open file descriptor 142: ==42110== ==42110== ==42110== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==42110== ==42110== ==42110== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42110== ==42110== ==42110== ==42110== HEAP SUMMARY: ==42110== in use at exit: 35,606 bytes in 295 blocks ==42110== total heap usage: 2,356,975 allocs, 2,356,680 frees, 1,137,256,321 bytes allocated ==42110== ==42110== LEAK SUMMARY: ==42110== definitely lost: 0 bytes in 0 blocks ==42110== indirectly lost: 0 bytes in 0 blocks ==42110== possibly lost: 0 bytes in 0 blocks ==42110== still reachable: 24 bytes in 2 blocks ==42110== suppressed: 35,582 bytes in 293 blocks ==42110== Reachable blocks (those to which a pointer was found) are not shown. ==42110== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42110== ==42110== For lists of detected and suppressed errors, rerun with: -s ==42110== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 31)