==41177== Memcheck, a memory error detector ==41177== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41177== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41177== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==41177== Parent PID: 25029 ==41177== ==41177== ==41177== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41177== Open file descriptor 12: ==41177== at 0x10BC00BD: pipe (pipe.c:29) ==41177== by 0x1B3AA07D: ??? ==41177== by 0x155464CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41177== by 0x104C8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41177== by 0x10461D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41177== by 0x627BD38: PetscInitialize (pinit.c:924) ==41177== by 0x103AB56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41177== by 0x103AB5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41177== by 0x19353D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41177== by 0x18B60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41177== by 0x18EC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41177== by 0x18EAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41177== by 0x18F13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41177== by 0x187F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==41177== ==41177== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41177== at 0x10BC4A5C: __open_nocancel (open64_nocancel.c:39) ==41177== by 0x10B48B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41177== by 0x6120822: ??? ==41177== by 0x612096F: ??? ==41177== by 0x155EB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41177== by 0x155EB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41177== by 0x155A1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41177== by 0x155462DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41177== by 0x104C8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41177== by 0x10461D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41177== by 0x627BD38: PetscInitialize (pinit.c:924) ==41177== by 0x103AB56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41177== by 0x103AB5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41177== by 0x19353D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41177== by 0x18B60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41177== by 0x18EC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41177== by 0x18EAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41177== by 0x18F13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41177== by 0x187F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==41177== ==41177== Open file descriptor 145: ==41177== ==41177== ==41177== Open file descriptor 142: ==41177== ==41177== ==41177== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==41177== ==41177== ==41177== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41177== ==41177== ==41177== ==41177== HEAP SUMMARY: ==41177== in use at exit: 35,295 bytes in 291 blocks ==41177== total heap usage: 845,830 allocs, 845,539 frees, 129,831,133 bytes allocated ==41177== ==41177== LEAK SUMMARY: ==41177== definitely lost: 0 bytes in 0 blocks ==41177== indirectly lost: 0 bytes in 0 blocks ==41177== possibly lost: 0 bytes in 0 blocks ==41177== still reachable: 120 bytes in 4 blocks ==41177== suppressed: 35,175 bytes in 287 blocks ==41177== Reachable blocks (those to which a pointer was found) are not shown. ==41177== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41177== ==41177== For lists of detected and suppressed errors, rerun with: -s ==41177== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)