==27115== Memcheck, a memory error detector ==27115== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==27115== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==27115== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==27115== Parent PID: 25029 ==27115== ==27115== ==27115== FILE DESCRIPTORS: 9 open (3 std) at exit. ==27115== Open file descriptor 12: ==27115== at 0xF0B90BD: pipe (pipe.c:29) ==27115== by 0x196E607D: ??? ==27115== by 0x13C7E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27115== by 0xED06418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27115== by 0xEC9FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27115== by 0xD996D38: PetscInitialize (pinit.c:924) ==27115== by 0xD4BF56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27115== by 0xD4BF5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27115== by 0x133B29: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==27115== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27115== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27115== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27115== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27115== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==27115== ==27115== Open file descriptor 8: /dev/shm/open_mpi.0000 ==27115== at 0xF0BDA5C: __open_nocancel (open64_nocancel.c:39) ==27115== by 0xF041B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==27115== by 0xD4F6822: ??? ==27115== by 0xD4F696F: ??? ==27115== by 0x13D236DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27115== by 0x13D23938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27115== by 0x13CD9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27115== by 0x13C7E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27115== by 0xED06418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27115== by 0xEC9FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27115== by 0xD996D38: PetscInitialize (pinit.c:924) ==27115== by 0xD4BF56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27115== by 0xD4BF5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27115== by 0x133B29: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==27115== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27115== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27115== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27115== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27115== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==27115== ==27115== Open file descriptor 145: ==27115== ==27115== ==27115== Open file descriptor 142: ==27115== ==27115== ==27115== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==27115== ==27115== ==27115== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==27115== ==27115== ==27115== ==27115== HEAP SUMMARY: ==27115== in use at exit: 35,215 bytes in 290 blocks ==27115== total heap usage: 51,356 allocs, 51,066 frees, 8,905,989 bytes allocated ==27115== ==27115== LEAK SUMMARY: ==27115== definitely lost: 0 bytes in 0 blocks ==27115== indirectly lost: 0 bytes in 0 blocks ==27115== possibly lost: 0 bytes in 0 blocks ==27115== still reachable: 56 bytes in 3 blocks ==27115== suppressed: 35,159 bytes in 287 blocks ==27115== Reachable blocks (those to which a pointer was found) are not shown. ==27115== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==27115== ==27115== For lists of detected and suppressed errors, rerun with: -s ==27115== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)