==43851== Memcheck, a memory error detector ==43851== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43851== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43851== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCardiacSimulation -malloc_debug -malloc_dump -memory_info ==43851== Parent PID: 24421 ==43851== ==43851== ==43851== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43851== Open file descriptor 12: ==43851== at 0x894C0BD: pipe (pipe.c:29) ==43851== by 0x1436307D: ??? ==43851== by 0xCCD74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43851== by 0x8D1A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43851== by 0x8CB3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43851== by 0x91F7D38: PetscInitialize (pinit.c:924) ==43851== by 0x823356F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43851== by 0x82335BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43851== by 0x1202B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43851== by 0x11A98D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43851== by 0x11E13C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43851== by 0x11DFDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43851== by 0x11E673: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43851== by 0x118DB5: main (TestCardiacSimulation.cpp:19) ==43851== ==43851== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43851== at 0x8950A5C: __open_nocancel (open64_nocancel.c:39) ==43851== by 0x88D4B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43851== by 0x826A822: ??? ==43851== by 0x826A96F: ??? ==43851== by 0xCD7C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43851== by 0xCD7C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43851== by 0xCD32922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43851== by 0xCCD72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43851== by 0x8D1A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43851== by 0x8CB3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43851== by 0x91F7D38: PetscInitialize (pinit.c:924) ==43851== by 0x823356F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43851== by 0x82335BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43851== by 0x1202B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43851== by 0x11A98D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43851== by 0x11E13C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43851== by 0x11DFDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43851== by 0x11E673: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43851== by 0x118DB5: main (TestCardiacSimulation.cpp:19) ==43851== ==43851== Open file descriptor 145: ==43851== ==43851== ==43851== Open file descriptor 142: ==43851== ==43851== ==43851== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCardiacSimulation_valgrind.txt ==43851== ==43851== ==43851== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43851== ==43851== ==43851== ==43851== HEAP SUMMARY: ==43851== in use at exit: 42,738 bytes in 311 blocks ==43851== total heap usage: 4,745,662 allocs, 4,745,351 frees, 1,498,719,207 bytes allocated ==43851== ==43851== LEAK SUMMARY: ==43851== definitely lost: 0 bytes in 0 blocks ==43851== indirectly lost: 0 bytes in 0 blocks ==43851== possibly lost: 0 bytes in 0 blocks ==43851== still reachable: 7,156 bytes in 18 blocks ==43851== suppressed: 35,582 bytes in 293 blocks ==43851== Reachable blocks (those to which a pointer was found) are not shown. ==43851== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43851== ==43851== For lists of detected and suppressed errors, rerun with: -s ==43851== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 228 from 31)