==41422== Memcheck, a memory error detector ==41422== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41422== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41422== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==41422== Parent PID: 24419 ==41422== ==41422== ==41422== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41422== Open file descriptor 12: ==41422== at 0xC1250BD: pipe (pipe.c:29) ==41422== by 0x1436A07D: ??? ==41422== by 0xFB1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41422== by 0xBA2D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41422== by 0xB9C6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41422== by 0x826BD38: PetscInitialize (pinit.c:924) ==41422== by 0xB8F656F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41422== by 0xB8F65BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41422== by 0x140858: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41422== by 0x13A03D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41422== by 0x13D718: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41422== by 0x13D5B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41422== by 0x13DC4F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41422== by 0x1382C5: main (TestBidomainProblem.cpp:19) ==41422== ==41422== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41422== at 0xC129A5C: __open_nocancel (open64_nocancel.c:39) ==41422== by 0xC0ADB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41422== by 0x8110822: ??? ==41422== by 0x811096F: ??? ==41422== by 0xFBC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41422== by 0xFBC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41422== by 0xFB79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41422== by 0xFB1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41422== by 0xBA2D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41422== by 0xB9C6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41422== by 0x826BD38: PetscInitialize (pinit.c:924) ==41422== by 0xB8F656F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41422== by 0xB8F65BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41422== by 0x140858: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41422== by 0x13A03D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41422== by 0x13D718: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41422== by 0x13D5B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41422== by 0x13DC4F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41422== by 0x1382C5: main (TestBidomainProblem.cpp:19) ==41422== ==41422== Open file descriptor 145: ==41422== ==41422== ==41422== Open file descriptor 142: ==41422== ==41422== ==41422== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==41422== ==41422== ==41422== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41422== ==41422== ==41422== ==41422== HEAP SUMMARY: ==41422== in use at exit: 35,679 bytes in 299 blocks ==41422== total heap usage: 557,890 allocs, 557,591 frees, 160,473,762 bytes allocated ==41422== ==41422== LEAK SUMMARY: ==41422== definitely lost: 0 bytes in 0 blocks ==41422== indirectly lost: 0 bytes in 0 blocks ==41422== possibly lost: 0 bytes in 0 blocks ==41422== still reachable: 24 bytes in 2 blocks ==41422== suppressed: 35,655 bytes in 297 blocks ==41422== Reachable blocks (those to which a pointer was found) are not shown. ==41422== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41422== ==41422== For lists of detected and suppressed errors, rerun with: -s ==41422== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 100 from 35)