==40170== Memcheck, a memory error detector ==40170== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40170== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40170== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellPopulationBoundaryConditionTutorial -malloc_debug -malloc_dump -memory_info ==40170== Parent PID: 24419 ==40170== ==40170== ==40170== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40170== Open file descriptor 12: ==40170== at 0x10D1F0BD: pipe (pipe.c:29) ==40170== by 0x196E107D: ??? ==40170== by 0x14C8E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40170== by 0x1096C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40170== by 0x10905D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40170== by 0xF5FCD38: PetscInitialize (pinit.c:924) ==40170== by 0xF12756F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40170== by 0xF1275BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40170== by 0x144105: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40170== by 0x13EF9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40170== by 0x141686: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40170== by 0x141582: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40170== by 0x141B95: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40170== by 0x13D795: main (TestCreatingAndUsingANewCellPopulationBoundaryConditionTutorial.cpp:18) ==40170== ==40170== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40170== at 0x10D23A5C: __open_nocancel (open64_nocancel.c:39) ==40170== by 0x10CA7B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40170== by 0xF15E822: ??? ==40170== by 0xF15E96F: ??? ==40170== by 0x14D336DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40170== by 0x14D33938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40170== by 0x14CE9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40170== by 0x14C8E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40170== by 0x1096C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40170== by 0x10905D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40170== by 0xF5FCD38: PetscInitialize (pinit.c:924) ==40170== by 0xF12756F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40170== by 0xF1275BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40170== by 0x144105: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40170== by 0x13EF9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40170== by 0x141686: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40170== by 0x141582: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40170== by 0x141B95: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40170== by 0x13D795: main (TestCreatingAndUsingANewCellPopulationBoundaryConditionTutorial.cpp:18) ==40170== ==40170== Open file descriptor 145: ==40170== ==40170== ==40170== Open file descriptor 142: ==40170== ==40170== ==40170== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellPopulationBoundaryConditionTutorial_valgrind.txt ==40170== ==40170== ==40170== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40170== ==40170== ==40170== ==40170== HEAP SUMMARY: ==40170== in use at exit: 35,215 bytes in 290 blocks ==40170== total heap usage: 411,490 allocs, 411,200 frees, 62,918,608 bytes allocated ==40170== ==40170== LEAK SUMMARY: ==40170== definitely lost: 0 bytes in 0 blocks ==40170== indirectly lost: 0 bytes in 0 blocks ==40170== possibly lost: 0 bytes in 0 blocks ==40170== still reachable: 56 bytes in 3 blocks ==40170== suppressed: 35,159 bytes in 287 blocks ==40170== Reachable blocks (those to which a pointer was found) are not shown. ==40170== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40170== ==40170== For lists of detected and suppressed errors, rerun with: -s ==40170== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)