==26315== Memcheck, a memory error detector ==26315== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26315== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26315== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==26315== Parent PID: 24230 ==26315== ==26315== ==26315== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26315== Open file descriptor 12: ==26315== at 0xF8530BD: pipe (pipe.c:29) ==26315== by 0x1971207D: ??? ==26315== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26315== by 0x1014D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26315== by 0x100E6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26315== by 0x102D6D38: PetscInitialize (pinit.c:924) ==26315== by 0xF153A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26315== by 0xF153A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26315== by 0x122376: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26315== by 0x11DA51: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26315== by 0x120220: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26315== by 0x1200B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26315== by 0x120783: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26315== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==26315== ==26315== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26315== at 0xF857A5C: __open_nocancel (open64_nocancel.c:39) ==26315== by 0xF7DBB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26315== by 0xF18B822: ??? ==26315== by 0xF18B96F: ??? ==26315== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26315== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26315== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26315== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26315== by 0x1014D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26315== by 0x100E6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26315== by 0x102D6D38: PetscInitialize (pinit.c:924) ==26315== by 0xF153A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26315== by 0xF153A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26315== by 0x122376: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26315== by 0x11DA51: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26315== by 0x120220: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26315== by 0x1200B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26315== by 0x120783: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26315== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==26315== ==26315== Open file descriptor 145: ==26315== ==26315== ==26315== Open file descriptor 142: ==26315== ==26315== ==26315== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==26315== ==26315== ==26315== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26315== ==26315== ==26315== ==26315== HEAP SUMMARY: ==26315== in use at exit: 17,050 bytes in 73 blocks ==26315== total heap usage: 1,109,077 allocs, 1,109,004 frees, 84,015,361 bytes allocated ==26315== ==26315== LEAK SUMMARY: ==26315== definitely lost: 0 bytes in 0 blocks ==26315== indirectly lost: 0 bytes in 0 blocks ==26315== possibly lost: 0 bytes in 0 blocks ==26315== still reachable: 56 bytes in 3 blocks ==26315== suppressed: 16,994 bytes in 70 blocks ==26315== Reachable blocks (those to which a pointer was found) are not shown. ==26315== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26315== ==26315== For lists of detected and suppressed errors, rerun with: -s ==26315== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)