==41169== Memcheck, a memory error detector ==41169== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41169== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41169== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==41169== Parent PID: 24230 ==41169== ==41169== ==41169== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41169== Open file descriptor 12: ==41169== at 0xC1270BD: pipe (pipe.c:29) ==41169== by 0x1436C07D: ??? ==41169== by 0xFB1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41169== by 0xBA2F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41169== by 0xB9C8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41169== by 0x826DD38: PetscInitialize (pinit.c:924) ==41169== by 0xB8F7A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41169== by 0xB8F7A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41169== by 0x140A3A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41169== by 0x13A181: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41169== by 0x13DCB2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41169== by 0x13DB4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41169== by 0x13E215: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41169== by 0x1382C5: main (TestBidomainProblem.cpp:19) ==41169== ==41169== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41169== at 0xC12BA5C: __open_nocancel (open64_nocancel.c:39) ==41169== by 0xC0AFB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41169== by 0x8112822: ??? ==41169== by 0x811296F: ??? ==41169== by 0xFBC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41169== by 0xFBC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41169== by 0xFB79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41169== by 0xFB1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41169== by 0xBA2F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41169== by 0xB9C8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41169== by 0x826DD38: PetscInitialize (pinit.c:924) ==41169== by 0xB8F7A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41169== by 0xB8F7A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41169== by 0x140A3A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41169== by 0x13A181: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41169== by 0x13DCB2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41169== by 0x13DB4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41169== by 0x13E215: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41169== by 0x1382C5: main (TestBidomainProblem.cpp:19) ==41169== ==41169== Open file descriptor 145: ==41169== ==41169== ==41169== Open file descriptor 142: ==41169== ==41169== ==41169== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==41169== ==41169== ==41169== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41169== ==41169== ==41169== ==41169== HEAP SUMMARY: ==41169== in use at exit: 17,514 bytes in 82 blocks ==41169== total heap usage: 569,632 allocs, 569,550 frees, 217,186,044 bytes allocated ==41169== ==41169== LEAK SUMMARY: ==41169== definitely lost: 0 bytes in 0 blocks ==41169== indirectly lost: 0 bytes in 0 blocks ==41169== possibly lost: 0 bytes in 0 blocks ==41169== still reachable: 24 bytes in 2 blocks ==41169== suppressed: 17,490 bytes in 80 blocks ==41169== Reachable blocks (those to which a pointer was found) are not shown. ==41169== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41169== ==41169== For lists of detected and suppressed errors, rerun with: -s ==41169== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 100 from 35)