==26038== Memcheck, a memory error detector ==26038== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26038== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26038== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==26038== Parent PID: 24230 ==26038== ==26038== ==26038== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26038== Open file descriptor 12: ==26038== at 0xF0DE0BD: pipe (pipe.c:29) ==26038== by 0x1971107D: ??? ==26038== by 0x13CA94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26038== by 0xED2B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26038== by 0xECC4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26038== by 0xD9BBD38: PetscInitialize (pinit.c:924) ==26038== by 0xD4E3A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26038== by 0xD4E3A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26038== by 0x132CA5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26038== by 0x12C027: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26038== by 0x12F310: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26038== by 0x12F203: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26038== by 0x12F84B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26038== by 0x12A6E5: main (TestCaUpdateRules.cpp:18) ==26038== ==26038== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26038== at 0xF0E2A5C: __open_nocancel (open64_nocancel.c:39) ==26038== by 0xF066B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26038== by 0xD51B822: ??? ==26038== by 0xD51B96F: ??? ==26038== by 0x13D4E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26038== by 0x13D4E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26038== by 0x13D04922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26038== by 0x13CA92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26038== by 0xED2B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26038== by 0xECC4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26038== by 0xD9BBD38: PetscInitialize (pinit.c:924) ==26038== by 0xD4E3A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26038== by 0xD4E3A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26038== by 0x132CA5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26038== by 0x12C027: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26038== by 0x12F310: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26038== by 0x12F203: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26038== by 0x12F84B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26038== by 0x12A6E5: main (TestCaUpdateRules.cpp:18) ==26038== ==26038== Open file descriptor 145: ==26038== ==26038== ==26038== Open file descriptor 142: ==26038== ==26038== ==26038== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==26038== ==26038== ==26038== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26038== ==26038== ==26038== ==26038== HEAP SUMMARY: ==26038== in use at exit: 17,050 bytes in 73 blocks ==26038== total heap usage: 39,072 allocs, 38,999 frees, 7,038,100 bytes allocated ==26038== ==26038== LEAK SUMMARY: ==26038== definitely lost: 0 bytes in 0 blocks ==26038== indirectly lost: 0 bytes in 0 blocks ==26038== possibly lost: 0 bytes in 0 blocks ==26038== still reachable: 56 bytes in 3 blocks ==26038== suppressed: 16,994 bytes in 70 blocks ==26038== Reachable blocks (those to which a pointer was found) are not shown. ==26038== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26038== ==26038== For lists of detected and suppressed errors, rerun with: -s ==26038== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)