==25624== Memcheck, a memory error detector ==25624== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25624== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25624== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedEllipticPdes -malloc_debug -malloc_dump -memory_info ==25624== Parent PID: 24230 ==25624== ==25624== ==25624== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25624== Open file descriptor 12: ==25624== at 0x10E330BD: pipe (pipe.c:29) ==25624== by 0x1971007D: ??? ==25624== by 0x14CBD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25624== by 0x10999418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25624== by 0x10932D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25624== by 0xF629D38: PetscInitialize (pinit.c:924) ==25624== by 0xF153A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25624== by 0xF153A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25624== by 0x12D6AB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25624== by 0x1283A1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25624== by 0x12B46C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25624== by 0x12B304: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25624== by 0x12B9CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25624== by 0x126685: main (TestCellBasedEllipticPdes.cpp:19) ==25624== ==25624== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25624== at 0x10E37A5C: __open_nocancel (open64_nocancel.c:39) ==25624== by 0x10DBBB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25624== by 0xF18B822: ??? ==25624== by 0xF18B96F: ??? ==25624== by 0x14D626DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25624== by 0x14D62938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25624== by 0x14D18922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25624== by 0x14CBD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25624== by 0x10999418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25624== by 0x10932D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25624== by 0xF629D38: PetscInitialize (pinit.c:924) ==25624== by 0xF153A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25624== by 0xF153A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25624== by 0x12D6AB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25624== by 0x1283A1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25624== by 0x12B46C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25624== by 0x12B304: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25624== by 0x12B9CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25624== by 0x126685: main (TestCellBasedEllipticPdes.cpp:19) ==25624== ==25624== Open file descriptor 145: ==25624== ==25624== ==25624== Open file descriptor 142: ==25624== ==25624== ==25624== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedEllipticPdes_valgrind.txt ==25624== ==25624== ==25624== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25624== ==25624== ==25624== ==25624== HEAP SUMMARY: ==25624== in use at exit: 17,050 bytes in 73 blocks ==25624== total heap usage: 59,249 allocs, 59,176 frees, 10,927,007 bytes allocated ==25624== ==25624== LEAK SUMMARY: ==25624== definitely lost: 0 bytes in 0 blocks ==25624== indirectly lost: 0 bytes in 0 blocks ==25624== possibly lost: 0 bytes in 0 blocks ==25624== still reachable: 56 bytes in 3 blocks ==25624== suppressed: 16,994 bytes in 70 blocks ==25624== Reachable blocks (those to which a pointer was found) are not shown. ==25624== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25624== ==25624== For lists of detected and suppressed errors, rerun with: -s ==25624== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)