==26039== Memcheck, a memory error detector ==26039== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26039== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26039== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellKillers -malloc_debug -malloc_dump -memory_info ==26039== Parent PID: 24230 ==26039== ==26039== ==26039== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26039== Open file descriptor 12: ==26039== at 0x10E330BD: pipe (pipe.c:29) ==26039== by 0x1971007D: ??? ==26039== by 0x14CBD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26039== by 0x10999418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26039== by 0x10932D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26039== by 0xF629D38: PetscInitialize (pinit.c:924) ==26039== by 0xF153A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26039== by 0xF153A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26039== by 0x1A54E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26039== by 0x19D3BD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26039== by 0x1A13BC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26039== by 0x1A1254: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26039== by 0x1A191F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26039== by 0x19B6A2: main (TestCellKillers.cpp:19) ==26039== ==26039== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26039== at 0x10E37A5C: __open_nocancel (open64_nocancel.c:39) ==26039== by 0x10DBBB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26039== by 0xF18B822: ??? ==26039== by 0xF18B96F: ??? ==26039== by 0x14D626DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26039== by 0x14D62938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26039== by 0x14D18922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26039== by 0x14CBD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26039== by 0x10999418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26039== by 0x10932D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26039== by 0xF629D38: PetscInitialize (pinit.c:924) ==26039== by 0xF153A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26039== by 0xF153A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26039== by 0x1A54E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26039== by 0x19D3BD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26039== by 0x1A13BC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26039== by 0x1A1254: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26039== by 0x1A191F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26039== by 0x19B6A2: main (TestCellKillers.cpp:19) ==26039== ==26039== Open file descriptor 145: ==26039== ==26039== ==26039== Open file descriptor 142: ==26039== ==26039== ==26039== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellKillers_valgrind.txt ==26039== ==26039== ==26039== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26039== ==26039== ==26039== ==26039== HEAP SUMMARY: ==26039== in use at exit: 17,050 bytes in 73 blocks ==26039== total heap usage: 105,653 allocs, 105,580 frees, 12,213,829 bytes allocated ==26039== ==26039== LEAK SUMMARY: ==26039== definitely lost: 0 bytes in 0 blocks ==26039== indirectly lost: 0 bytes in 0 blocks ==26039== possibly lost: 0 bytes in 0 blocks ==26039== still reachable: 56 bytes in 3 blocks ==26039== suppressed: 16,994 bytes in 70 blocks ==26039== Reachable blocks (those to which a pointer was found) are not shown. ==26039== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26039== ==26039== For lists of detected and suppressed errors, rerun with: -s ==26039== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)