==40009== Memcheck, a memory error detector ==40009== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40009== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40009== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellPropertyTutorial -malloc_debug -malloc_dump -memory_info ==40009== Parent PID: 24230 ==40009== ==40009== ==40009== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40009== Open file descriptor 12: ==40009== at 0x10D4C0BD: pipe (pipe.c:29) ==40009== by 0x1971007D: ??? ==40009== by 0x14CBD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40009== by 0x10999418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40009== by 0x10932D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40009== by 0xF629D38: PetscInitialize (pinit.c:924) ==40009== by 0xF153A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40009== by 0xF153A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40009== by 0x150565: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40009== by 0x14A73D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40009== by 0x14E14A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40009== by 0x14DFE2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40009== by 0x14E6AD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40009== by 0x148A22: main (TestCreatingAndUsingANewCellPropertyTutorial.cpp:19) ==40009== ==40009== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40009== at 0x10D50A5C: __open_nocancel (open64_nocancel.c:39) ==40009== by 0x10CD4B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40009== by 0xF18B822: ??? ==40009== by 0xF18B96F: ??? ==40009== by 0x14D626DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40009== by 0x14D62938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40009== by 0x14D18922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40009== by 0x14CBD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40009== by 0x10999418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40009== by 0x10932D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40009== by 0xF629D38: PetscInitialize (pinit.c:924) ==40009== by 0xF153A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40009== by 0xF153A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40009== by 0x150565: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40009== by 0x14A73D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40009== by 0x14E14A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40009== by 0x14DFE2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40009== by 0x14E6AD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40009== by 0x148A22: main (TestCreatingAndUsingANewCellPropertyTutorial.cpp:19) ==40009== ==40009== Open file descriptor 145: ==40009== ==40009== ==40009== Open file descriptor 142: ==40009== ==40009== ==40009== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellPropertyTutorial_valgrind.txt ==40009== ==40009== ==40009== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40009== ==40009== ==40009== ==40009== HEAP SUMMARY: ==40009== in use at exit: 16,977 bytes in 69 blocks ==40009== total heap usage: 2,607,742 allocs, 2,607,673 frees, 241,828,975 bytes allocated ==40009== ==40009== LEAK SUMMARY: ==40009== definitely lost: 0 bytes in 0 blocks ==40009== indirectly lost: 0 bytes in 0 blocks ==40009== possibly lost: 0 bytes in 0 blocks ==40009== still reachable: 56 bytes in 3 blocks ==40009== suppressed: 16,921 bytes in 66 blocks ==40009== Reachable blocks (those to which a pointer was found) are not shown. ==40009== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40009== ==40009== For lists of detected and suppressed errors, rerun with: -s ==40009== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)