==40047== Memcheck, a memory error detector ==40047== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40047== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40047== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==40047== Parent PID: 24230 ==40047== ==40047== ==40047== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40047== Open file descriptor 12: ==40047== at 0x110770BD: pipe (pipe.c:29) ==40047== by 0x1971107D: ??? ==40047== by 0x14D0F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40047== by 0x10BDD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40047== by 0x10B76D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40047== by 0xF86DD38: PetscInitialize (pinit.c:924) ==40047== by 0xF397A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40047== by 0xF397A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40047== by 0x26152D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40047== by 0x2598CF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40047== by 0x25F33C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40047== by 0x25F1D4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40047== by 0x25F89F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40047== by 0x255E02: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==40047== ==40047== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40047== at 0x1107BA5C: __open_nocancel (open64_nocancel.c:39) ==40047== by 0x10FFFB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40047== by 0xF3CF822: ??? ==40047== by 0xF3CF96F: ??? ==40047== by 0x14DB46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40047== by 0x14DB4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40047== by 0x14D6A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40047== by 0x14D0F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40047== by 0x10BDD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40047== by 0x10B76D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40047== by 0xF86DD38: PetscInitialize (pinit.c:924) ==40047== by 0xF397A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40047== by 0xF397A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40047== by 0x26152D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40047== by 0x2598CF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40047== by 0x25F33C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40047== by 0x25F1D4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40047== by 0x25F89F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40047== by 0x255E02: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==40047== ==40047== Open file descriptor 145: ==40047== ==40047== ==40047== Open file descriptor 142: ==40047== ==40047== ==40047== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==40047== ==40047== ==40047== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40047== ==40047== ==40047== ==40047== HEAP SUMMARY: ==40047== in use at exit: 16,977 bytes in 69 blocks ==40047== total heap usage: 3,810,022 allocs, 3,809,953 frees, 179,153,705 bytes allocated ==40047== ==40047== LEAK SUMMARY: ==40047== definitely lost: 0 bytes in 0 blocks ==40047== indirectly lost: 0 bytes in 0 blocks ==40047== possibly lost: 0 bytes in 0 blocks ==40047== still reachable: 56 bytes in 3 blocks ==40047== suppressed: 16,921 bytes in 66 blocks ==40047== Reachable blocks (those to which a pointer was found) are not shown. ==40047== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40047== ==40047== For lists of detected and suppressed errors, rerun with: -s ==40047== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)