==25367== Memcheck, a memory error detector ==25367== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25367== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25367== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/pde/test/TestHdf5Converters -malloc_debug -malloc_dump -memory_info ==25367== Parent PID: 24230 ==25367== ==25367== ==25367== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25367== Open file descriptor 12: ==25367== at 0x736A0BD: pipe (pipe.c:29) ==25367== by 0x1050007D: ??? ==25367== by 0x9F754CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25367== by 0x7669418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25367== by 0x7602D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25367== by 0x77F0D38: PetscInitialize (pinit.c:924) ==25367== by 0x6916A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25367== by 0x6916A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25367== by 0x1215AE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25367== by 0x11CB77: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25367== by 0x11F638: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25367== by 0x11F52B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25367== by 0x11FB73: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25367== by 0x11B235: main (TestHdf5Converters.cpp:18) ==25367== ==25367== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25367== at 0x736EA5C: __open_nocancel (open64_nocancel.c:39) ==25367== by 0x72F2B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25367== by 0x694E822: ??? ==25367== by 0x694E96F: ??? ==25367== by 0xA01A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25367== by 0xA01A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25367== by 0x9FD0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25367== by 0x9F752DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25367== by 0x7669418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25367== by 0x7602D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25367== by 0x77F0D38: PetscInitialize (pinit.c:924) ==25367== by 0x6916A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25367== by 0x6916A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25367== by 0x1215AE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25367== by 0x11CB77: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25367== by 0x11F638: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25367== by 0x11F52B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25367== by 0x11FB73: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25367== by 0x11B235: main (TestHdf5Converters.cpp:18) ==25367== ==25367== Open file descriptor 145: ==25367== ==25367== ==25367== Open file descriptor 142: ==25367== ==25367== ==25367== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5Converters_valgrind.txt ==25367== ==25367== ==25367== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25367== ==25367== ==25367== ==25367== HEAP SUMMARY: ==25367== in use at exit: 16,954 bytes in 72 blocks ==25367== total heap usage: 189,653 allocs, 189,581 frees, 62,381,798 bytes allocated ==25367== ==25367== LEAK SUMMARY: ==25367== definitely lost: 0 bytes in 0 blocks ==25367== indirectly lost: 0 bytes in 0 blocks ==25367== possibly lost: 0 bytes in 0 blocks ==25367== still reachable: 24 bytes in 2 blocks ==25367== suppressed: 16,930 bytes in 70 blocks ==25367== Reachable blocks (those to which a pointer was found) are not shown. ==25367== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25367== ==25367== For lists of detected and suppressed errors, rerun with: -s ==25367== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)