==40408== Memcheck, a memory error detector ==40408== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40408== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40408== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestMirams2010WntOdeSystem -malloc_debug -malloc_dump -memory_info ==40408== Parent PID: 24230 ==40408== ==40408== ==40408== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40408== Open file descriptor 12: ==40408== at 0xF3E60BD: pipe (pipe.c:29) ==40408== by 0x1B3D407D: ??? ==40408== by 0x144134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40408== by 0x11B38418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40408== by 0x11AD1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40408== by 0x11C7DD38: PetscInitialize (pinit.c:924) ==40408== by 0xF04EA25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40408== by 0xF04EA73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40408== by 0x1263BC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40408== by 0x12155F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40408== by 0x12430A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40408== by 0x1241FD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40408== by 0x124845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40408== by 0x11F065: main (TestMirams2010WntOdeSystem.cpp:18) ==40408== ==40408== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40408== at 0xF3EAA5C: __open_nocancel (open64_nocancel.c:39) ==40408== by 0xF36EB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40408== by 0x611C822: ??? ==40408== by 0x611C96F: ??? ==40408== by 0x144B86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40408== by 0x144B8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40408== by 0x1446E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40408== by 0x144132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40408== by 0x11B38418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40408== by 0x11AD1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40408== by 0x11C7DD38: PetscInitialize (pinit.c:924) ==40408== by 0xF04EA25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40408== by 0xF04EA73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40408== by 0x1263BC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40408== by 0x12155F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40408== by 0x12430A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40408== by 0x1241FD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40408== by 0x124845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40408== by 0x11F065: main (TestMirams2010WntOdeSystem.cpp:18) ==40408== ==40408== Open file descriptor 145: ==40408== ==40408== ==40408== Open file descriptor 142: ==40408== ==40408== ==40408== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMirams2010WntOdeSystem_valgrind.txt ==40408== ==40408== ==40408== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40408== ==40408== ==40408== ==40408== HEAP SUMMARY: ==40408== in use at exit: 17,066 bytes in 73 blocks ==40408== total heap usage: 50,130 allocs, 50,057 frees, 8,205,475 bytes allocated ==40408== ==40408== LEAK SUMMARY: ==40408== definitely lost: 0 bytes in 0 blocks ==40408== indirectly lost: 0 bytes in 0 blocks ==40408== possibly lost: 0 bytes in 0 blocks ==40408== still reachable: 56 bytes in 3 blocks ==40408== suppressed: 17,010 bytes in 70 blocks ==40408== Reachable blocks (those to which a pointer was found) are not shown. ==40408== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40408== ==40408== For lists of detected and suppressed errors, rerun with: -s ==40408== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)