==26228== Memcheck, a memory error detector ==26228== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26228== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26228== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithParticles -malloc_debug -malloc_dump -memory_info ==26228== Parent PID: 24230 ==26228== ==26228== ==26228== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26228== Open file descriptor 12: ==26228== at 0xF97E0BD: pipe (pipe.c:29) ==26228== by 0x1971207D: ??? ==26228== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26228== by 0x10278418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26228== by 0x10211D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26228== by 0x103BDD38: PetscInitialize (pinit.c:924) ==26228== by 0xF153A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26228== by 0xF153A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26228== by 0x2E1F0A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26228== by 0x2D859D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26228== by 0x2DDAA4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26228== by 0x2DD93C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26228== by 0x2DE007: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26228== by 0x2D6882: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==26228== ==26228== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26228== at 0xF982A5C: __open_nocancel (open64_nocancel.c:39) ==26228== by 0xF906B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26228== by 0xF18B822: ??? ==26228== by 0xF18B96F: ??? ==26228== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26228== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26228== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26228== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26228== by 0x10278418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26228== by 0x10211D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26228== by 0x103BDD38: PetscInitialize (pinit.c:924) ==26228== by 0xF153A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26228== by 0xF153A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26228== by 0x2E1F0A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26228== by 0x2D859D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26228== by 0x2DDAA4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26228== by 0x2DD93C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26228== by 0x2DE007: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26228== by 0x2D6882: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==26228== ==26228== Open file descriptor 145: ==26228== ==26228== ==26228== Open file descriptor 142: ==26228== ==26228== ==26228== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithParticles_valgrind.txt ==26228== ==26228== ==26228== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26228== ==26228== ==26228== ==26228== HEAP SUMMARY: ==26228== in use at exit: 17,050 bytes in 73 blocks ==26228== total heap usage: 95,444 allocs, 95,371 frees, 14,521,829 bytes allocated ==26228== ==26228== LEAK SUMMARY: ==26228== definitely lost: 0 bytes in 0 blocks ==26228== indirectly lost: 0 bytes in 0 blocks ==26228== possibly lost: 0 bytes in 0 blocks ==26228== still reachable: 56 bytes in 3 blocks ==26228== suppressed: 16,994 bytes in 70 blocks ==26228== Reachable blocks (those to which a pointer was found) are not shown. ==26228== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26228== ==26228== For lists of detected and suppressed errors, rerun with: -s ==26228== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)