==26207== Memcheck, a memory error detector ==26207== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26207== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26207== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26207== Parent PID: 24230 ==26207== ==26207== ==26207== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26207== Open file descriptor 12: ==26207== at 0xF9260BD: pipe (pipe.c:29) ==26207== by 0x1971207D: ??? ==26207== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26207== by 0x10191418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26207== by 0x1012AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26207== by 0x102D6D38: PetscInitialize (pinit.c:924) ==26207== by 0xF1E2A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26207== by 0xF1E2A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26207== by 0x2E287A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26207== by 0x2D921D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26207== by 0x2DE5AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26207== by 0x2DE442: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26207== by 0x2DEB0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26207== by 0x2D7502: main (TestNodeBasedCellPopulation.cpp:19) ==26207== ==26207== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26207== at 0xF92AA5C: __open_nocancel (open64_nocancel.c:39) ==26207== by 0xF8AEB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26207== by 0xF21A822: ??? ==26207== by 0xF21A96F: ??? ==26207== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26207== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26207== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26207== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26207== by 0x10191418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26207== by 0x1012AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26207== by 0x102D6D38: PetscInitialize (pinit.c:924) ==26207== by 0xF1E2A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26207== by 0xF1E2A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26207== by 0x2E287A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26207== by 0x2D921D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26207== by 0x2DE5AA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26207== by 0x2DE442: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26207== by 0x2DEB0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26207== by 0x2D7502: main (TestNodeBasedCellPopulation.cpp:19) ==26207== ==26207== Open file descriptor 145: ==26207== ==26207== ==26207== Open file descriptor 142: ==26207== ==26207== ==26207== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==26207== ==26207== ==26207== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26207== ==26207== ==26207== ==26207== HEAP SUMMARY: ==26207== in use at exit: 16,977 bytes in 69 blocks ==26207== total heap usage: 30,274,697 allocs, 30,274,628 frees, 1,832,760,651 bytes allocated ==26207== ==26207== LEAK SUMMARY: ==26207== definitely lost: 0 bytes in 0 blocks ==26207== indirectly lost: 0 bytes in 0 blocks ==26207== possibly lost: 0 bytes in 0 blocks ==26207== still reachable: 56 bytes in 3 blocks ==26207== suppressed: 16,921 bytes in 66 blocks ==26207== Reachable blocks (those to which a pointer was found) are not shown. ==26207== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26207== ==26207== For lists of detected and suppressed errors, rerun with: -s ==26207== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)