==25586== Memcheck, a memory error detector ==25586== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25586== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25586== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedSrnModels -malloc_debug -malloc_dump -memory_info ==25586== Parent PID: 24230 ==25586== ==25586== ==25586== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25586== Open file descriptor 12: ==25586== at 0xED970BD: pipe (pipe.c:29) ==25586== by 0x1971007D: ??? ==25586== by 0x13C5C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25586== by 0xE9E6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25586== by 0xE97FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25586== by 0xD676D38: PetscInitialize (pinit.c:924) ==25586== by 0xD4E3A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25586== by 0xD4E3A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25586== by 0x12E45D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25586== by 0x127441: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25586== by 0x12A760: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25586== by 0x12A5F8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25586== by 0x12ACC3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25586== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==25586== ==25586== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25586== at 0xED9BA5C: __open_nocancel (open64_nocancel.c:39) ==25586== by 0xED1FB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25586== by 0xD51B822: ??? ==25586== by 0xD51B96F: ??? ==25586== by 0x13D016DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25586== by 0x13D01938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25586== by 0x13CB7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25586== by 0x13C5C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25586== by 0xE9E6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25586== by 0xE97FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25586== by 0xD676D38: PetscInitialize (pinit.c:924) ==25586== by 0xD4E3A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25586== by 0xD4E3A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25586== by 0x12E45D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25586== by 0x127441: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25586== by 0x12A760: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25586== by 0x12A5F8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25586== by 0x12ACC3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25586== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==25586== ==25586== Open file descriptor 145: ==25586== ==25586== ==25586== Open file descriptor 142: ==25586== ==25586== ==25586== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedSrnModels_valgrind.txt ==25586== ==25586== ==25586== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25586== ==25586== ==25586== ==25586== HEAP SUMMARY: ==25586== in use at exit: 17,066 bytes in 74 blocks ==25586== total heap usage: 40,568 allocs, 40,494 frees, 7,317,249 bytes allocated ==25586== ==25586== LEAK SUMMARY: ==25586== definitely lost: 0 bytes in 0 blocks ==25586== indirectly lost: 0 bytes in 0 blocks ==25586== possibly lost: 0 bytes in 0 blocks ==25586== still reachable: 72 bytes in 4 blocks ==25586== suppressed: 16,994 bytes in 70 blocks ==25586== Reachable blocks (those to which a pointer was found) are not shown. ==25586== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25586== ==25586== For lists of detected and suppressed errors, rerun with: -s ==25586== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)