==26757== Memcheck, a memory error detector ==26757== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26757== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26757== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26757== Parent PID: 24230 ==26757== ==26757== ==26757== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26757== Open file descriptor 12: ==26757== at 0xF97E0BD: pipe (pipe.c:29) ==26757== by 0x1971207D: ??? ==26757== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26757== by 0x10278418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26757== by 0x10211D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26757== by 0x103BDD38: PetscInitialize (pinit.c:924) ==26757== by 0xF153A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26757== by 0xF153A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26757== by 0x21385E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26757== by 0x20AF9D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26757== by 0x20F5C6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26757== by 0x20F45E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26757== by 0x20FB29: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26757== by 0x209282: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==26757== ==26757== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26757== at 0xF982A5C: __open_nocancel (open64_nocancel.c:39) ==26757== by 0xF906B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26757== by 0xF18B822: ??? ==26757== by 0xF18B96F: ??? ==26757== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26757== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26757== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26757== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26757== by 0x10278418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26757== by 0x10211D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26757== by 0x103BDD38: PetscInitialize (pinit.c:924) ==26757== by 0xF153A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26757== by 0xF153A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26757== by 0x21385E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26757== by 0x20AF9D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26757== by 0x20F5C6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26757== by 0x20F45E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26757== by 0x20FB29: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26757== by 0x209282: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==26757== ==26757== Open file descriptor 145: ==26757== ==26757== ==26757== Open file descriptor 142: ==26757== ==26757== ==26757== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==26757== ==26757== ==26757== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26757== ==26757== ==26757== ==26757== HEAP SUMMARY: ==26757== in use at exit: 17,009 bytes in 70 blocks ==26757== total heap usage: 18,911,009 allocs, 18,910,939 frees, 28,852,458,630 bytes allocated ==26757== ==26757== LEAK SUMMARY: ==26757== definitely lost: 0 bytes in 0 blocks ==26757== indirectly lost: 0 bytes in 0 blocks ==26757== possibly lost: 0 bytes in 0 blocks ==26757== still reachable: 88 bytes in 4 blocks ==26757== suppressed: 16,921 bytes in 66 blocks ==26757== Reachable blocks (those to which a pointer was found) are not shown. ==26757== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26757== ==26757== For lists of detected and suppressed errors, rerun with: -s ==26757== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)