==40087== Memcheck, a memory error detector ==40087== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40087== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40087== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningContactInhibitionSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==40087== Parent PID: 24230 ==40087== ==40087== ==40087== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40087== Open file descriptor 12: ==40087== at 0x10DF10BD: pipe (pipe.c:29) ==40087== by 0x1971007D: ??? ==40087== by 0x14CBB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40087== by 0x10957418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40087== by 0x108F0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40087== by 0xF5E7D38: PetscInitialize (pinit.c:924) ==40087== by 0xF153A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40087== by 0xF153A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40087== by 0x1283ED: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40087== by 0x1237B7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40087== by 0x125EF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40087== by 0x125DE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40087== by 0x12642F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40087== by 0x121E75: main (TestRunningContactInhibitionSimulationsTutorial.cpp:18) ==40087== ==40087== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40087== at 0x10DF5A5C: __open_nocancel (open64_nocancel.c:39) ==40087== by 0x10D79B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40087== by 0xF18B822: ??? ==40087== by 0xF18B96F: ??? ==40087== by 0x14D626DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40087== by 0x14D62938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40087== by 0x14D18922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40087== by 0x14CBB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40087== by 0x10957418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40087== by 0x108F0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40087== by 0xF5E7D38: PetscInitialize (pinit.c:924) ==40087== by 0xF153A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40087== by 0xF153A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40087== by 0x1283ED: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40087== by 0x1237B7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40087== by 0x125EF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40087== by 0x125DE8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40087== by 0x12642F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40087== by 0x121E75: main (TestRunningContactInhibitionSimulationsTutorial.cpp:18) ==40087== ==40087== Open file descriptor 145: ==40087== ==40087== ==40087== Open file descriptor 142: ==40087== ==40087== ==40087== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningContactInhibitionSimulationsTutorial_valgrind.txt ==40087== ==40087== ==40087== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40087== ==40087== ==40087== ==40087== HEAP SUMMARY: ==40087== in use at exit: 16,977 bytes in 69 blocks ==40087== total heap usage: 11,454,836 allocs, 11,454,767 frees, 3,453,583,927 bytes allocated ==40087== ==40087== LEAK SUMMARY: ==40087== definitely lost: 0 bytes in 0 blocks ==40087== indirectly lost: 0 bytes in 0 blocks ==40087== possibly lost: 0 bytes in 0 blocks ==40087== still reachable: 56 bytes in 3 blocks ==40087== suppressed: 16,921 bytes in 66 blocks ==40087== Reachable blocks (those to which a pointer was found) are not shown. ==40087== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40087== ==40087== For lists of detected and suppressed errors, rerun with: -s ==40087== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)