==40140== Memcheck, a memory error detector ==40140== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40140== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40140== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDifferentialAdhesionSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==40140== Parent PID: 24230 ==40140== ==40140== ==40140== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40140== Open file descriptor 12: ==40140== at 0x10D0A0BD: pipe (pipe.c:29) ==40140== by 0x1971007D: ??? ==40140== by 0x14CBB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40140== by 0x10957418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40140== by 0x108F0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40140== by 0xF5E7D38: PetscInitialize (pinit.c:924) ==40140== by 0xF153A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40140== by 0xF153A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40140== by 0x123ED9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40140== by 0x11F7D7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40140== by 0x121E20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40140== by 0x121D14: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40140== by 0x12235B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40140== by 0x11DE95: main (TestRunningDifferentialAdhesionSimulationsTutorial.cpp:18) ==40140== ==40140== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40140== at 0x10D0EA5C: __open_nocancel (open64_nocancel.c:39) ==40140== by 0x10C92B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40140== by 0xF18B822: ??? ==40140== by 0xF18B96F: ??? ==40140== by 0x14D626DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40140== by 0x14D62938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40140== by 0x14D18922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40140== by 0x14CBB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40140== by 0x10957418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40140== by 0x108F0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40140== by 0xF5E7D38: PetscInitialize (pinit.c:924) ==40140== by 0xF153A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40140== by 0xF153A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40140== by 0x123ED9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40140== by 0x11F7D7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40140== by 0x121E20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40140== by 0x121D14: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40140== by 0x12235B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40140== by 0x11DE95: main (TestRunningDifferentialAdhesionSimulationsTutorial.cpp:18) ==40140== ==40140== Open file descriptor 145: ==40140== ==40140== ==40140== Open file descriptor 142: ==40140== ==40140== ==40140== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDifferentialAdhesionSimulationsTutorial_valgrind.txt ==40140== ==40140== ==40140== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40140== ==40140== ==40140== ==40140== HEAP SUMMARY: ==40140== in use at exit: 16,993 bytes in 70 blocks ==40140== total heap usage: 2,554,829 allocs, 2,554,759 frees, 133,081,778 bytes allocated ==40140== ==40140== LEAK SUMMARY: ==40140== definitely lost: 0 bytes in 0 blocks ==40140== indirectly lost: 0 bytes in 0 blocks ==40140== possibly lost: 0 bytes in 0 blocks ==40140== still reachable: 72 bytes in 4 blocks ==40140== suppressed: 16,921 bytes in 66 blocks ==40140== Reachable blocks (those to which a pointer was found) are not shown. ==40140== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40140== ==40140== For lists of detected and suppressed errors, rerun with: -s ==40140== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)