==25878== Memcheck, a memory error detector ==25878== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25878== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25878== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationTime -malloc_debug -malloc_dump -memory_info ==25878== Parent PID: 24230 ==25878== ==25878== ==25878== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25878== Open file descriptor 12: ==25878== at 0xD8E20BD: pipe (pipe.c:29) ==25878== by 0x1971107D: ??? ==25878== by 0x12B1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25878== by 0xFE4A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25878== by 0xFDE3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25878== by 0xFF91D38: PetscInitialize (pinit.c:924) ==25878== by 0xD4E3A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25878== by 0xD4E3A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25878== by 0x15B9E6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25878== by 0x155F4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25878== by 0x1599B4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25878== by 0x15984C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25878== by 0x159F17: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25878== by 0x154232: main (TestSimulationTime.cpp:19) ==25878== ==25878== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25878== at 0xD8E6A5C: __open_nocancel (open64_nocancel.c:39) ==25878== by 0xD86AB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25878== by 0xD51B822: ??? ==25878== by 0xD51B96F: ??? ==25878== by 0x12BC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25878== by 0x12BC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25878== by 0x12B79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25878== by 0x12B1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25878== by 0xFE4A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25878== by 0xFDE3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25878== by 0xFF91D38: PetscInitialize (pinit.c:924) ==25878== by 0xD4E3A25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25878== by 0xD4E3A73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25878== by 0x15B9E6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25878== by 0x155F4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25878== by 0x1599B4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25878== by 0x15984C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25878== by 0x159F17: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25878== by 0x154232: main (TestSimulationTime.cpp:19) ==25878== ==25878== Open file descriptor 145: ==25878== ==25878== ==25878== Open file descriptor 142: ==25878== ==25878== ==25878== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationTime_valgrind.txt ==25878== ==25878== ==25878== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25878== ==25878== ==25878== ==25878== HEAP SUMMARY: ==25878== in use at exit: 17,018 bytes in 72 blocks ==25878== total heap usage: 36,502 allocs, 36,430 frees, 6,753,795 bytes allocated ==25878== ==25878== LEAK SUMMARY: ==25878== definitely lost: 0 bytes in 0 blocks ==25878== indirectly lost: 0 bytes in 0 blocks ==25878== possibly lost: 0 bytes in 0 blocks ==25878== still reachable: 24 bytes in 2 blocks ==25878== suppressed: 16,994 bytes in 70 blocks ==25878== Reachable blocks (those to which a pointer was found) are not shown. ==25878== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25878== ==25878== For lists of detected and suppressed errors, rerun with: -s ==25878== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)