==40417== Memcheck, a memory error detector ==40417== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40417== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40417== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestWntCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==40417== Parent PID: 24230 ==40417== ==40417== ==40417== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40417== Open file descriptor 12: ==40417== at 0x1089D0BD: pipe (pipe.c:29) ==40417== by 0x1B3D107D: ??? ==40417== by 0x1556D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40417== by 0x104EA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40417== by 0x10483D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40417== by 0x6277D38: PetscInitialize (pinit.c:924) ==40417== by 0x103CCA25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40417== by 0x103CCA73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40417== by 0x12668D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40417== by 0x121907: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40417== by 0x124612: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40417== by 0x124505: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40417== by 0x124B4D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40417== by 0x11FFC5: main (TestWntCellCycleOdeSystem.cpp:18) ==40417== ==40417== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40417== at 0x108A1A5C: __open_nocancel (open64_nocancel.c:39) ==40417== by 0x10825B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40417== by 0x611C822: ??? ==40417== by 0x611C96F: ??? ==40417== by 0x156126DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40417== by 0x15612938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40417== by 0x155C8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40417== by 0x1556D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40417== by 0x104EA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40417== by 0x10483D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40417== by 0x6277D38: PetscInitialize (pinit.c:924) ==40417== by 0x103CCA25: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40417== by 0x103CCA73: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40417== by 0x12668D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40417== by 0x121907: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40417== by 0x124612: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40417== by 0x124505: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40417== by 0x124B4D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40417== by 0x11FFC5: main (TestWntCellCycleOdeSystem.cpp:18) ==40417== ==40417== Open file descriptor 145: ==40417== ==40417== ==40417== Open file descriptor 142: ==40417== ==40417== ==40417== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestWntCellCycleOdeSystem_valgrind.txt ==40417== ==40417== ==40417== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40417== ==40417== ==40417== ==40417== HEAP SUMMARY: ==40417== in use at exit: 17,034 bytes in 72 blocks ==40417== total heap usage: 168,885 allocs, 168,813 frees, 87,756,868 bytes allocated ==40417== ==40417== LEAK SUMMARY: ==40417== definitely lost: 0 bytes in 0 blocks ==40417== indirectly lost: 0 bytes in 0 blocks ==40417== possibly lost: 0 bytes in 0 blocks ==40417== still reachable: 24 bytes in 2 blocks ==40417== suppressed: 17,010 bytes in 70 blocks ==40417== Reachable blocks (those to which a pointer was found) are not shown. ==40417== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40417== ==40417== For lists of detected and suppressed errors, rerun with: -s ==40417== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)