==27112== Memcheck, a memory error detector ==27112== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==27112== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==27112== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestDeltaNotchModifier -malloc_debug -malloc_dump -memory_info ==27112== Parent PID: 25025 ==27112== ==27112== ==27112== FILE DESCRIPTORS: 9 open (3 std) at exit. ==27112== Open file descriptor 12: ==27112== at 0xF8610BD: pipe (pipe.c:29) ==27112== by 0x196DB07D: ??? ==27112== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27112== by 0x1015C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27112== by 0x100F5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27112== by 0x102A1D38: PetscInitialize (pinit.c:924) ==27112== by 0xF12056F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27112== by 0xF1205BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27112== by 0x20841C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27112== by 0x1FFFD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27112== by 0x2039D2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27112== by 0x203872: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27112== by 0x203F09: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27112== by 0x1FE3F5: main (TestDeltaNotchModifier.cpp:19) ==27112== ==27112== Open file descriptor 8: /dev/shm/open_mpi.0000 ==27112== at 0xF865A5C: __open_nocancel (open64_nocancel.c:39) ==27112== by 0xF7E9B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==27112== by 0xF157822: ??? ==27112== by 0xF15796F: ??? ==27112== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27112== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27112== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27112== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27112== by 0x1015C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27112== by 0x100F5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27112== by 0x102A1D38: PetscInitialize (pinit.c:924) ==27112== by 0xF12056F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27112== by 0xF1205BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27112== by 0x20841C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27112== by 0x1FFFD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27112== by 0x2039D2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27112== by 0x203872: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27112== by 0x203F09: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27112== by 0x1FE3F5: main (TestDeltaNotchModifier.cpp:19) ==27112== ==27112== Open file descriptor 145: ==27112== ==27112== ==27112== Open file descriptor 142: ==27112== ==27112== ==27112== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestDeltaNotchModifier_valgrind.txt ==27112== ==27112== ==27112== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==27112== ==27112== ==27112== ==27112== HEAP SUMMARY: ==27112== in use at exit: 35,142 bytes in 286 blocks ==27112== total heap usage: 5,816,601 allocs, 5,816,315 frees, 7,601,788,767 bytes allocated ==27112== ==27112== LEAK SUMMARY: ==27112== definitely lost: 0 bytes in 0 blocks ==27112== indirectly lost: 0 bytes in 0 blocks ==27112== possibly lost: 0 bytes in 0 blocks ==27112== still reachable: 56 bytes in 3 blocks ==27112== suppressed: 35,086 bytes in 283 blocks ==27112== Reachable blocks (those to which a pointer was found) are not shown. ==27112== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==27112== ==27112== For lists of detected and suppressed errors, rerun with: -s ==27112== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)