==42423== Memcheck, a memory error detector ==42423== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42423== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42423== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestGeneralizedRushLarsen -malloc_debug -malloc_dump -memory_info ==42423== Parent PID: 25025 ==42423== ==42423== ==42423== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42423== Open file descriptor 12: ==42423== at 0x87D70BD: pipe (pipe.c:29) ==42423== by 0x1436307D: ??? ==42423== by 0xC8D54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42423== by 0x8BA5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42423== by 0x8B3ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42423== by 0x9080D38: PetscInitialize (pinit.c:924) ==42423== by 0x840356F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42423== by 0x84035BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42423== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42423== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42423== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42423== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42423== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42423== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==42423== ==42423== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42423== at 0x87DBA5C: __open_nocancel (open64_nocancel.c:39) ==42423== by 0x875FB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42423== by 0x843A822: ??? ==42423== by 0x843A96F: ??? ==42423== by 0xC97A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42423== by 0xC97A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42423== by 0xC930922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42423== by 0xC8D52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42423== by 0x8BA5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42423== by 0x8B3ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42423== by 0x9080D38: PetscInitialize (pinit.c:924) ==42423== by 0x840356F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42423== by 0x84035BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42423== by 0x11C6A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42423== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42423== by 0x11A2AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42423== by 0x11A14C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42423== by 0x11A7E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42423== by 0x115CD5: main (TestGeneralizedRushLarsen.cpp:19) ==42423== ==42423== Open file descriptor 145: ==42423== ==42423== ==42423== Open file descriptor 142: ==42423== ==42423== ==42423== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGeneralizedRushLarsen_valgrind.txt ==42423== ==42423== ==42423== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42423== ==42423== ==42423== ==42423== HEAP SUMMARY: ==42423== in use at exit: 38,731 bytes in 293 blocks ==42423== total heap usage: 3,038,034 allocs, 3,037,741 frees, 281,635,447 bytes allocated ==42423== ==42423== LEAK SUMMARY: ==42423== definitely lost: 0 bytes in 0 blocks ==42423== indirectly lost: 0 bytes in 0 blocks ==42423== possibly lost: 0 bytes in 0 blocks ==42423== still reachable: 3,629 bytes in 10 blocks ==42423== suppressed: 35,102 bytes in 283 blocks ==42423== Reachable blocks (those to which a pointer was found) are not shown. ==42423== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42423== ==42423== For lists of detected and suppressed errors, rerun with: -s ==42423== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)