==42504== Memcheck, a memory error detector ==42504== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42504== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42504== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem -malloc_debug -malloc_dump -memory_info ==42504== Parent PID: 25025 ==42504== ==42504== ==42504== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42504== Open file descriptor 12: ==42504== at 0x85940BD: pipe (pipe.c:29) ==42504== by 0x1436307D: ??? ==42504== by 0xC8D54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42504== by 0x8962418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42504== by 0x88FBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42504== by 0x8E3DD38: PetscInitialize (pinit.c:924) ==42504== by 0x81BE56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42504== by 0x81BE5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42504== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42504== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42504== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42504== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42504== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42504== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==42504== ==42504== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42504== at 0x8598A5C: __open_nocancel (open64_nocancel.c:39) ==42504== by 0x851CB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42504== by 0x81F5822: ??? ==42504== by 0x81F596F: ??? ==42504== by 0xC97A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42504== by 0xC97A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42504== by 0xC930922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42504== by 0xC8D52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42504== by 0x8962418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42504== by 0x88FBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42504== by 0x8E3DD38: PetscInitialize (pinit.c:924) ==42504== by 0x81BE56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42504== by 0x81BE5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42504== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==42504== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42504== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42504== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42504== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42504== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==42504== ==42504== Open file descriptor 145: ==42504== ==42504== ==42504== Open file descriptor 142: ==42504== ==42504== ==42504== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem_valgrind.txt ==42504== ==42504== ==42504== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42504== ==42504== ==42504== ==42504== HEAP SUMMARY: ==42504== in use at exit: 35,199 bytes in 289 blocks ==42504== total heap usage: 32,816 allocs, 32,527 frees, 7,449,891 bytes allocated ==42504== ==42504== LEAK SUMMARY: ==42504== definitely lost: 0 bytes in 0 blocks ==42504== indirectly lost: 0 bytes in 0 blocks ==42504== possibly lost: 0 bytes in 0 blocks ==42504== still reachable: 24 bytes in 2 blocks ==42504== suppressed: 35,175 bytes in 287 blocks ==42504== Reachable blocks (those to which a pointer was found) are not shown. ==42504== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42504== ==42504== For lists of detected and suppressed errors, rerun with: -s ==42504== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)