==27277== Memcheck, a memory error detector ==27277== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==27277== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==27277== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNumericalMethods -malloc_debug -malloc_dump -memory_info ==27277== Parent PID: 25025 ==27277== ==27277== ==27277== FILE DESCRIPTORS: 9 open (3 std) at exit. ==27277== Open file descriptor 12: ==27277== at 0xF9060BD: pipe (pipe.c:29) ==27277== by 0x196DB07D: ??? ==27277== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27277== by 0x10201418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27277== by 0x1019AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27277== by 0x10388D38: PetscInitialize (pinit.c:924) ==27277== by 0xF12056F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27277== by 0xF1205BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27277== by 0x13A648: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27277== by 0x13504D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27277== by 0x137DD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27277== by 0x137C74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27277== by 0x13830B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27277== by 0x133475: main (TestNumericalMethods.cpp:19) ==27277== ==27277== Open file descriptor 8: /dev/shm/open_mpi.0000 ==27277== at 0xF90AA5C: __open_nocancel (open64_nocancel.c:39) ==27277== by 0xF88EB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==27277== by 0xF157822: ??? ==27277== by 0xF15796F: ??? ==27277== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27277== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27277== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==27277== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==27277== by 0x10201418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27277== by 0x1019AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==27277== by 0x10388D38: PetscInitialize (pinit.c:924) ==27277== by 0xF12056F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==27277== by 0xF1205BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==27277== by 0x13A648: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==27277== by 0x13504D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==27277== by 0x137DD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==27277== by 0x137C74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==27277== by 0x13830B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==27277== by 0x133475: main (TestNumericalMethods.cpp:19) ==27277== ==27277== Open file descriptor 145: ==27277== ==27277== ==27277== Open file descriptor 142: ==27277== ==27277== ==27277== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNumericalMethods_valgrind.txt ==27277== ==27277== ==27277== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==27277== ==27277== ==27277== ==27277== HEAP SUMMARY: ==27277== in use at exit: 35,215 bytes in 290 blocks ==27277== total heap usage: 53,406 allocs, 53,116 frees, 10,798,667 bytes allocated ==27277== ==27277== LEAK SUMMARY: ==27277== definitely lost: 0 bytes in 0 blocks ==27277== indirectly lost: 0 bytes in 0 blocks ==27277== possibly lost: 0 bytes in 0 blocks ==27277== still reachable: 56 bytes in 3 blocks ==27277== suppressed: 35,159 bytes in 287 blocks ==27277== Reachable blocks (those to which a pointer was found) are not shown. ==27277== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==27277== ==27277== For lists of detected and suppressed errors, rerun with: -s ==27277== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)