==25961== Memcheck, a memory error detector ==25961== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25961== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25961== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellsGenerator -malloc_debug -malloc_dump -memory_info ==25961== Parent PID: 24542 ==25961== ==25961== ==25961== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25961== Open file descriptor 12: ==25961== at 0xF81F0BD: pipe (pipe.c:29) ==25961== by 0x196DB07D: ??? ==25961== by 0x12B504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25961== by 0x10118418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25961== by 0x100B1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25961== by 0x102A1D38: PetscInitialize (pinit.c:924) ==25961== by 0xF12056F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25961== by 0xF1205BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25961== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25961== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25961== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25961== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25961== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25961== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25961== ==25961== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25961== at 0xF823A5C: __open_nocancel (open64_nocancel.c:39) ==25961== by 0xF7A7B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25961== by 0xF157822: ??? ==25961== by 0xF15796F: ??? ==25961== by 0x12BF56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25961== by 0x12BF5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25961== by 0x12BAB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25961== by 0x12B502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25961== by 0x10118418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25961== by 0x100B1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25961== by 0x102A1D38: PetscInitialize (pinit.c:924) ==25961== by 0xF12056F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25961== by 0xF1205BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25961== by 0x1248EE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25961== by 0x11F90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25961== by 0x122428: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25961== by 0x1222C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25961== by 0x12295F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25961== by 0x11DD35: main (TestCellsGenerator.cpp:19) ==25961== ==25961== Open file descriptor 145: ==25961== ==25961== ==25961== Open file descriptor 142: ==25961== ==25961== ==25961== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellsGenerator_valgrind.txt ==25961== ==25961== ==25961== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25961== ==25961== ==25961== ==25961== HEAP SUMMARY: ==25961== in use at exit: 35,279 bytes in 291 blocks ==25961== total heap usage: 53,238 allocs, 52,947 frees, 9,622,006 bytes allocated ==25961== ==25961== LEAK SUMMARY: ==25961== definitely lost: 0 bytes in 0 blocks ==25961== indirectly lost: 0 bytes in 0 blocks ==25961== possibly lost: 0 bytes in 0 blocks ==25961== still reachable: 120 bytes in 4 blocks ==25961== suppressed: 35,159 bytes in 287 blocks ==25961== Reachable blocks (those to which a pointer was found) are not shown. ==25961== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25961== ==25961== For lists of detected and suppressed errors, rerun with: -s ==25961== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)