==41689== Memcheck, a memory error detector ==41689== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41689== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41689== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestAirwayGenerator -malloc_debug -malloc_dump -memory_info ==41689== Parent PID: 24649 ==41689== ==41689== ==41689== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41689== Open file descriptor 12: ==41689== at 0x6BE00BD: pipe (pipe.c:29) ==41689== by 0x108B607D: ??? ==41689== by 0xB8534CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41689== by 0x5EE5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41689== by 0x5E7ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41689== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==41689== by 0x5DA556F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41689== by 0x5DA55BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41689== by 0x11872F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41689== by 0x11390D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41689== by 0x1166E8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41689== by 0x116588: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41689== by 0x116C1F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41689== by 0x111D35: main (TestAirwayGenerator.cpp:19) ==41689== ==41689== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41689== at 0x6BE4A5C: __open_nocancel (open64_nocancel.c:39) ==41689== by 0x6B68B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41689== by 0x5DDC822: ??? ==41689== by 0x5DDC96F: ??? ==41689== by 0xB8FA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41689== by 0xB8FA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41689== by 0xB8B0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41689== by 0xB8532DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41689== by 0x5EE5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41689== by 0x5E7ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41689== by 0x4A6CD38: PetscInitialize (pinit.c:924) ==41689== by 0x5DA556F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41689== by 0x5DA55BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41689== by 0x11872F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41689== by 0x11390D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41689== by 0x1166E8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41689== by 0x116588: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41689== by 0x116C1F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41689== by 0x111D35: main (TestAirwayGenerator.cpp:19) ==41689== ==41689== Open file descriptor 145: ==41689== ==41689== ==41689== Open file descriptor 142: ==41689== ==41689== ==41689== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAirwayGenerator_valgrind.txt ==41689== ==41689== ==41689== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41689== ==41689== ==41689== ==41689== HEAP SUMMARY: ==41689== in use at exit: 35,183 bytes in 289 blocks ==41689== total heap usage: 233,831 allocs, 233,542 frees, 256,415,969 bytes allocated ==41689== ==41689== LEAK SUMMARY: ==41689== definitely lost: 0 bytes in 0 blocks ==41689== indirectly lost: 0 bytes in 0 blocks ==41689== possibly lost: 0 bytes in 0 blocks ==41689== still reachable: 24 bytes in 2 blocks ==41689== suppressed: 35,159 bytes in 287 blocks ==41689== Reachable blocks (those to which a pointer was found) are not shown. ==41689== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41689== ==41689== For lists of detected and suppressed errors, rerun with: -s ==41689== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)