==41845== Memcheck, a memory error detector ==41845== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41845== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41845== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==41845== Parent PID: 24649 ==41845== ==41845== ==41845== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41845== Open file descriptor 12: ==41845== at 0xAAAC0BD: pipe (pipe.c:29) ==41845== by 0x1444F07D: ??? ==41845== by 0xDA404CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41845== by 0xA3B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41845== by 0xA34DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41845== by 0xB21ED38: PetscInitialize (pinit.c:924) ==41845== by 0xA25A56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41845== by 0xA25A5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41845== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41845== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41845== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41845== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41845== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41845== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==41845== ==41845== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41845== at 0xAAB0A5C: __open_nocancel (open64_nocancel.c:39) ==41845== by 0xAA34B8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41845== by 0xA291822: ??? ==41845== by 0xA29196F: ??? ==41845== by 0xDAE56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41845== by 0xDAE5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41845== by 0xDA9B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41845== by 0xDA402DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41845== by 0xA3B4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41845== by 0xA34DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41845== by 0xB21ED38: PetscInitialize (pinit.c:924) ==41845== by 0xA25A56F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41845== by 0xA25A5BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41845== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41845== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41845== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41845== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41845== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41845== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==41845== ==41845== Open file descriptor 145: ==41845== ==41845== ==41845== Open file descriptor 142: ==41845== ==41845== ==41845== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==41845== ==41845== ==41845== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41845== ==41845== ==41845== ==41845== HEAP SUMMARY: ==41845== in use at exit: 35,606 bytes in 295 blocks ==41845== total heap usage: 2,356,999 allocs, 2,356,704 frees, 1,137,259,766 bytes allocated ==41845== ==41845== LEAK SUMMARY: ==41845== definitely lost: 0 bytes in 0 blocks ==41845== indirectly lost: 0 bytes in 0 blocks ==41845== possibly lost: 0 bytes in 0 blocks ==41845== still reachable: 24 bytes in 2 blocks ==41845== suppressed: 35,582 bytes in 293 blocks ==41845== Reachable blocks (those to which a pointer was found) are not shown. ==41845== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41845== ==41845== For lists of detected and suppressed errors, rerun with: -s ==41845== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 31)