==26500== Memcheck, a memory error detector ==26500== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26500== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26500== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestGoldbeter1991OdeSystem -malloc_debug -malloc_dump -memory_info ==26500== Parent PID: 24649 ==26500== ==26500== ==26500== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26500== Open file descriptor 12: ==26500== at 0xF8850BD: pipe (pipe.c:29) ==26500== by 0x1A4A107D: ??? ==26500== by 0x1463C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26500== by 0xF4D2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26500== by 0xF46BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26500== by 0xE162D38: PetscInitialize (pinit.c:924) ==26500== by 0xDFD256F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26500== by 0xDFD25BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26500== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26500== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26500== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26500== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26500== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26500== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==26500== ==26500== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26500== at 0xF889A5C: __open_nocancel (open64_nocancel.c:39) ==26500== by 0xF80DB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26500== by 0xE009822: ??? ==26500== by 0xE00996F: ??? ==26500== by 0x146E16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26500== by 0x146E1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26500== by 0x14697922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26500== by 0x1463C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26500== by 0xF4D2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26500== by 0xF46BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26500== by 0xE162D38: PetscInitialize (pinit.c:924) ==26500== by 0xDFD256F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26500== by 0xDFD25BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26500== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26500== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26500== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26500== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26500== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26500== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==26500== ==26500== Open file descriptor 145: ==26500== ==26500== ==26500== Open file descriptor 142: ==26500== ==26500== ==26500== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGoldbeter1991OdeSystem_valgrind.txt ==26500== ==26500== ==26500== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26500== ==26500== ==26500== ==26500== HEAP SUMMARY: ==26500== in use at exit: 35,183 bytes in 289 blocks ==26500== total heap usage: 47,363 allocs, 47,074 frees, 8,908,497 bytes allocated ==26500== ==26500== LEAK SUMMARY: ==26500== definitely lost: 0 bytes in 0 blocks ==26500== indirectly lost: 0 bytes in 0 blocks ==26500== possibly lost: 0 bytes in 0 blocks ==26500== still reachable: 24 bytes in 2 blocks ==26500== suppressed: 35,159 bytes in 287 blocks ==26500== Reachable blocks (those to which a pointer was found) are not shown. ==26500== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26500== ==26500== For lists of detected and suppressed errors, rerun with: -s ==26500== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)