==26776== Memcheck, a memory error detector ==26776== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26776== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26776== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==26776== Parent PID: 24649 ==26776== ==26776== ==26776== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26776== Open file descriptor 12: ==26776== at 0x102B60BD: pipe (pipe.c:29) ==26776== by 0x1A4A007D: ??? ==26776== by 0x134F74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26776== by 0x10B20418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26776== by 0x10AB9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26776== by 0x10C65D38: PetscInitialize (pinit.c:924) ==26776== by 0xFB7356F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26776== by 0xFB735BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26776== by 0x2FF5B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26776== by 0x2F60D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26776== by 0x2FAA32: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26776== by 0x2FA8D2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26776== by 0x2FAF69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26776== by 0x2F44F5: main (TestNodeBasedCellPopulation.cpp:19) ==26776== ==26776== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26776== at 0x102BAA5C: __open_nocancel (open64_nocancel.c:39) ==26776== by 0x1023EB8F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26776== by 0xFBAA822: ??? ==26776== by 0xFBAA96F: ??? ==26776== by 0x1359C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26776== by 0x1359C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26776== by 0x13552922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26776== by 0x134F72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26776== by 0x10B20418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26776== by 0x10AB9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26776== by 0x10C65D38: PetscInitialize (pinit.c:924) ==26776== by 0xFB7356F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26776== by 0xFB735BD: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26776== by 0x2FF5B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26776== by 0x2F60D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26776== by 0x2FAA32: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26776== by 0x2FA8D2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26776== by 0x2FAF69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26776== by 0x2F44F5: main (TestNodeBasedCellPopulation.cpp:19) ==26776== ==26776== Open file descriptor 145: ==26776== ==26776== ==26776== Open file descriptor 142: ==26776== ==26776== ==26776== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==26776== ==26776== ==26776== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26776== ==26776== ==26776== ==26776== HEAP SUMMARY: ==26776== in use at exit: 35,142 bytes in 286 blocks ==26776== total heap usage: 30,275,542 allocs, 30,275,256 frees, 1,833,875,739 bytes allocated ==26776== ==26776== LEAK SUMMARY: ==26776== definitely lost: 0 bytes in 0 blocks ==26776== indirectly lost: 0 bytes in 0 blocks ==26776== possibly lost: 0 bytes in 0 blocks ==26776== still reachable: 56 bytes in 3 blocks ==26776== suppressed: 35,086 bytes in 283 blocks ==26776== Reachable blocks (those to which a pointer was found) are not shown. ==26776== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26776== ==26776== For lists of detected and suppressed errors, rerun with: -s ==26776== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 31 from 31)